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Fine mapping the soybean foxglove aphid resistance gene Raso2 in soybean using 180K Axiom® SoyaSNP genotyping assay

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  • URLhttps://db.koreascholar.com/Article/Detail/302876
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한국육종학회 (The Korean Breeding Society)
초록

Foxglove aphid, Aulacorthum solani (Kaltenbach), is a Hemipteran insect that infected a wide variety of plants worldwide and caused serious yield losses in crops. The foxglove aphid resistance gene, Raso2 was previously mapped from PI 366121 (Glycine soja Sieb. and Zucc.) to a 26cM marker interval on soybean chromosome 7. The development of additional genetic markers, which are mapped closer to Raso2 were required to accurately position the gene to improve the effectiveness of marker assisted selection. The objective of this study was to narrow down the putative QTL region, which is responsible to foxglove aphid resistance in PI366121 using recently developed high-density 180K Axiom SoyaSNP genotyping array. One hundred and forty one F8-derived F12 recombinant inbred lines developed from a cross of susceptible Williams 82 and resistant PI 366121, were used to generate a fine map of Raso2 interval. The phenotyping of antibiosis and antixenosis was done through choice and no-choice assays with total plant damage (TPD) and primary infestation leaf damage (PLD). The composite interval mapping analysis showed that the physical interval between two flanking makers, which was corresponding to Raso2, was narrowed down to 500kb on the Williams 82 genome assembly (Glyma2.0), instead of 4Mb in the previous report using Goldengate assay. In the Raso2 interval, there are about 60 candidate genes, including 4 of NBS-containing putative R genes. This result could be useful in breeding for new foxglove aphid resistant soybean cultivars.

저자
  • Ju Seok Lee(Department of Crop Science & Biotechnology , Dankook University)
  • Sungmin Kim(Department of Crop Science & Biotechnology , Dankook University)
  • Sumin Park(Department of Crop Science & Biotechnology , Dankook University)
  • Kyungryun Kim(Department of Crop Science & Biotechnology , Dankook University)
  • Mijung Cho(Department of Crop Science & Biotechnology , Dankook University)
  • Eunsil Kim(Department of Crop Science & Biotechnology , Dankook University)
  • Jin Kyo Jung(National Institute of Crop Science, RDA)
  • Jeong-Dong Lee(Division of Plant Bioscience, Kyungpook National Univ.)
  • Jung-Kyung Moon(National Institute of Crop Science, Rural Development Administration)
  • Namshin Kim(Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology)
  • Soon-chun Jeong(Bio-Evaluation Center, Korea Research Institute of Bioscience and Biotechnology)
  • Sungtaeg Kang(Department of Crop Science & Biotechnology , Dankook University) Corresponding Author