This study aimed to suggest a framework for biotope classification and evaluation based on habitat values to rationally establish management areas of national parks. The factors and indicators related to the biotope classification and evaluation were established based on integration from those of previous studies. The decision tree evaluation process was applied to the classification and evaluation of the biotope type level. The evaluation of the biotope group level was carried out to determine the weight and the AUEM (Adding Up Estimation Matrix) was applied for the final grades. As a result, the biotope type of Seolaksan National Park was classified into 43 types and Odaesan National Park was classified into 41 types. Bukhansan National Park, which is located in a metropolitan city, was classified into 49 types. In terms of biotope evaluation, grade Ⅲ had a ratio of 50.6%, the highest in Seolaksan national park. The ratios of grade I and grade II, which have great ecological-value, were respectively 12.0% and 36.5%. Grade II was 48.2%, the highest ratio in Odaesan National Park. The ratios of grades I and II were 10.8% and 37.9%, respectively. Grade III was 54.8%, the highest ratio in Bukhansan national park, and the ratios of grade I and grade II, which have great ecological-value were, respectively, 11.4% and 25.7%. The biotope values of major national parks were evaluated according to the type focusing on the actual vegetation. This framework can be considered for application to the spatial management of other types of protected areas.