This study developed an evaluation system of adaptation countermeasures for climate change in the water resources sector using the Analytic Hierarchy Process (AHP), and the assessment procedures were applied to the Second Chungcheongnam-do Climate Change Adaptation Implementation Plan (Chungnam Implementation Plan). Firstly, the evaluation criteria are composed of two levels according to the hierarchical structure, and AHP gives priority to 4 evaluation criteria of the first level and 16 alternative indicators of the second level. Secondly, after the importance of the evaluation criteria or indicators has been determined, the significance of each measure was evaluated by applying it to the water-sector measures of the Chungnam Implementation Plan, and the effectiveness of the evaluation system was validated. The Chungnam case study shows that the evaluation system will be more effective and efficient when it is applied during development phase rather than after the implementation plan is finalized. It is also expected that the evaluation system will be used to evaluate and prioritize climate change adaptation policies in other regions, and then to compare the means of adaptation to climate change in various regions and to select recommendation policies.