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Analysis of transcriptome change in high level of VitE accumulating rice mutant induced by in vitro mutagenesis

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  • URLhttps://db.koreascholar.com/Article/Detail/294494
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한국육종학회 (The Korean Breeding Society)
초록

VitE (tocotrienols and tocopherols) are micronutrients with antioxidant properties synthesized by photosynthetic bacteria and plants that play important roles in animal and human nutrition. A new mutant line, T1001-1, was isolated from in vitro mutagenized population by ionizing radiation and shown to have increased VitE contents. The total VitE content was 26% increased in the T1001-1 mutant seeds compare with cv. Dongan (wild-type). In addition, we showed that the mutant confers retarded seedling growth during the early seedling growth stage in rice. To study the molecular mechanism of VitE biosynthesis, we used the rice microarray to identify genes that are upor down-regulated in T1001-1 mutant. In addition, we identified differentially regulated pathway using MapMan analysis, which provides deep insight into changes in transcript and metabolites. Our results enhanced the transcription of genes involved in starch and lipid metabolism in T1001-1 mutant. To identify the molecular mechanisms of the events involving transcription factors in tocopherol accumulation, we compared the expression patterns of transcription factors. The AP2-EREBP, WRKY, C2H2 transcription factor were up-regulated, whereas the MYB family was down-regulated in T1001-1 mutant. Our results demonstrate change of important transcript in high level of VitE accumulating rice mutant.

저자
  • Jung Eun Hwang(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Sun-Hee Kim(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Kang-ie Lee(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Sun-Goo Hwang(Plant Genomics Lab, Department of Applied Plant Sciences, Kangwon Natl. University)
  • Jin-Baek Kim(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Sang Hoon Kim(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Bo-Keun Ha(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute)
  • Si-Yong Kang
  • Dong Sub Kim(Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute) Corresponding Author