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A Map-based Cloning Approach for the Identification of a Low Temperature Sensitive Gene sy-2 in Chilli pepper (Capsicum chinense)

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  • URLhttps://db.koreascholar.com/Article/Detail/302723
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한국육종학회 (The Korean Breeding Society)
초록

sy-2 (Seychelles-2) is a temperature sensitive natural mutant of Capsicum chinense and native to Seychelles Island in Africa. Previously we showed that sy-2 leaves were irregularly shaped and defective in chlorophyll development at temperatures below 24℃. A segregation test revealed that the sy-2 gene is controlled by a single recessive gene. To identify the sy-2 gene, we performed a map-based cloning approach using a total 600 individual F2 plants derived from crossing sy-2 and the wild type C. chinense ‘No.3341’. Fine-mapping of the locus allowed us to position sy-2 to an approximately 170-kb region flanked by markers IN2-1-1 and SNP-3-7 on chromosome 1. Among the approximately 36 hypothetical genes in this region several candidate genes including: HSP90-like ATPase family proteins, lipid-transfer proteins, calmodulin-domain protein kinases, and zinc finger proteins (ZFPs) were identified. RT-PCR and sequencing of the hypothetical genes are under way to identify sy-2.

저자
  • Li Liu(Department of Plant Science and Plant Genomics and Breeding Institute, Seoul National University)
  • Min-Young Kang(Department of Plant Science and Plant Genomics and Breeding Institute, Seoul National University)
  • Jin-Ho Kang(Department of Plant Science and Plant Genomics and Breeding Institute, Seoul National University)
  • Yeong Deuk Jo(Department of Plant Science and Plant Genomics and Breeding Institute, Seoul National University)
  • Sota Koeda(Department of Agronomy and Horticultural Science, Graduate School of Agriculture, Kyoto University, Japan)
  • Munetaka Hosokawa(Department of Agronomy and Horticultural Science, Graduate School of Agriculture, Kyoto University, Japan)
  • Doil Choi(Department of Plant Science, College of Agriculture and Life Sciences, Seoul National University)
  • Byoung-Cheorl Kang(Department of Plant Science and Plant Genomics and Breeding Institute, Seoul National University) Corresponding Author