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Cross-species amplification of newly developed Fagopyrum microsatellites across wild species KCI 등재
- 언어ENG
- URLhttps://db.koreascholar.com/Article/Detail/318725
There are about 16 species included in Fagopyrum (Polygonaceae) genus and some of them have been found recently and named. Fagopyrum genus is generally divided into two major groups: cymosum and urophyllum group. This study is to analyze the genetic diversity of Fagopyrum genus, to compare with the phylogeny result of Fagopyrim using previous analysis results, and to provide the information of each species specific marker by executing the cross-amplification on 3 species and 2 sub-species among cymosum group and 5 species among urophyllum using 136 SSR markers newly developed from common buckwheat. Cluster analysis using UPGMA showed two main clusters, each of the cymosum and urophyllum group. This result agree well with the previous findings on species relationships in Fagopyrum using different method approachs. In cross species amplification, our results revealed significant transferability of F. esculentum microsatellites to the 4 cymosum species (96.3% in F. esculentum ssp. Ancestral, 61.0% in F. tataricum ssp. tataricum, 36.0% in F. tataricum ssp. potanini, 97.1% in F. homotropicum). However, the percentage of 136 SSR markers were amplified in the urophyllum species (50.7% in F. urophyllum, 50% in F. lineare, 60.3% in F. leptopodum, 66.9% in F. capillatum, 66.2% in F. gracilipes) was lower than cymosum species, except F. tataricum. In addition, we identified 61 species specific markers among each species. These results demonstrate wide potential applicabilityof these markers for the study of inter-specific genetic diversity as well as evolutionary relationships among cultivated and wild buckwheat.
