In this research, the applicability of modified fouling index (MFI) on ultrapure water (UPW) production system was assessed to predict performance of reverse osmosis (RO) process. The practical study on MFI-UF was first performed at a pilot-scale UPW plant (Hwaseong-si, Gyeonggi-do, Korea), monitoring water quality parameters (i.e., conductivity, turbidity and TOC) as well as MFI-UF of pretreatment stage for 10 months. While water quality parameters were maintained in a stable manner, the MFI-UF was fluctuated implying the different propensity of RO influent. The increment of fouling potential was intimately related with RO performance, the aggravation of permeate quality. The sensitivity of MFI-UF was also verified by evaluating the fouling potential of reclaimed water in UPW production system.