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PCR 검출을 위한 최적의 토양 DNA 분리 및 정제법

Optimal Soil DNA Extraction and Purification Method for PCR Detection

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  • URLhttps://db.koreascholar.com/Article/Detail/352220
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한국약용작물학회 (The Korean Society of Medicinal Crop Science)
초록

Background : A soil-borne pathogenic fungus, Ilyonectria radicicola (Cylindrocarpon destructans) species complex causing ginseng root rot is the major pathogen on ginseng. DNA extraction from soil is necessary to confirm the presence of ginseng root rot pathogen, I. radicicola.
Methods and Results : In order to the increase the detection sensitivity of pathogens present in the soil, the existing soil DNA extraction method was modified to inctease the efficiency of the PCR reaction and to increase the amount of soil samples that can be analyed once by 500 times. For increase the DNA concentration, phenol : chloroform : isoamylalcohol (25 : 24 : 1) were used instead of chloroform : isoamylalcohol (24 : 1), and the sensitivity of PCR was increased by using purification kit.
Conclusion : The modified DNA extraction method can detect ginseng root rot pathogen (I. radicicola) with DNA extraction and purification higher than the conventional method.

저자
  • 서문원(농촌진흥청 국립원예특작과학원 인삼특작부 인삼과) | Mun Won Seo Corresponding author
  • 이승호(농촌진흥청 국립원예특작과학원 인삼특작부 인삼과) | Seung Ho Le
  • 한유경(농촌진흥청 국립원예특작과학원 인삼특작부 인삼과) | You Kyoung Han
  • 배영석(농촌진흥청 국립원예특작과학원 인삼특작부 인삼과) | You Kyoung Han