The domestic ports become less competitive for the out of dated equipments and inefficient information system. Specially, Inchon Port, which is the second largest port of Korea, has the point at issue such as the excessive logistics cost because of the limit of handling capacity and the chronic demurrage. In this paper to develope the simulation programs the basic input parameters such as arrival intervals, cargo tons, service rates are analyzed and the probability density functions for there variable are estimated. Also to perform the conception of continuous berth utilization, the berth and cargo classification is reconstructed. And the more actual simulation is realized by using more detailed depth representation of water The simulation model is executed based on the knowledge base and database, and is constructed using Visual Basic and Access database. Simulation results reveal that this study suitably reflect the real berth operation and waiting time of ships is shortened.