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다유전자 분석을 통한 한국산 녹조류 Desmodesmus속의 계통 KCI 등재

Phylogeny of Desmodesmus (Scenedesmaceae, Chlorophyceae) in Korea based on multigene data analysis

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  • URLhttps://db.koreascholar.com/Article/Detail/429097
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한국환경생물학회 (Korean Society Of Environmental Biology)
초록

The genus Desmodesmus (Chodat) S.S. An, T. Friedl & E. Hegewald is ubiquitous in freshwater ecosystems, such as rivers, ponds, and wetlands. The actual species diversity and distribution of the genus is unknown because of morphological plasticity affected by habitats. Currently, 38 Desmodesmus species have been reported in Korea most of which transferred from the genus Scenedesmus recently, however, no phylogenetic relationships have been studied yet. Despite the challenges in analyzing relationships among Desmodesmus species through the morphology, ecology, and original description, this study focused on examining species-level relationships using the FBCC culture strains isolated from Korea. A total of 299 sequences (66 of 18S rRNA, 47 of atpB, 67 of petA, 52 of rbcL, and 67 of tufA) were newly determined and used for phylogenetic analysis. Four plastid genes tend to have higher variation than 18S rRNA in the variable sites and P-distance. From the combined phylogeny, the Desmodesmus included six clades such as Clade-1: D. pseudoserratus and D. serratus, Clade-2: D. communis, D. dispar, D. maximus, D. pannonicus, unidentified Desmodesmus sp., Clade-3: D. bicaudatus and D. intermedius, Clade-4: D. microspina, D. multivariablis, D. pleiomorphus, D. subspicatus, Clade-5: D. abundans, D. kissii, and D. spinosus, and Clade-6: D. armatus, D. armatus var. longispina, D. opoliensis, unidentified Desmodesmus spp. The new sequence data from FBCC strains will be used to identify species and study the molecular ecology of scenedesmacean green algae in freshwater ecosystems. The phylogenetic information from this study will expand our understanding of Desmodesmus species diversity in Korea.

목차
1. 서 론
2. 재료 및 방법
    2.1. 배양주 확보 및 형태관찰
    2.2. 유전자 정보 확보 및 계통분석
3. 결과 및 고찰
    3.1. 한국산 Desmodesmus속 녹조류 종 목록 및 기재
    3.2. Desmodesmus속의 다유전자 정보 비교
    3.3. Desmodesmus속 계통관계
적 요
CRediT authorship contribution statement
Declaration of Competing Interest
사 사
SUPPORTING INFORMATION
REFERENCES
저자
  • 유영채(한국해양과학기술원 해양생태연구센터, 국가연구소대학교 해양과학과) | Yeong Chae Yoo (Marine Ecosystem Research Center, Korea Institute of Ocean Science & Technology, Busan 49111, Republic of Korea, Department of Ocean Science, Korea National University of Science and Technology, Daejeon 34113, Republic of Korea)
  • 이남주(경기대학교 생명과학과) | Nam-Ju Lee (Department of Life Science, College of Natural Science, Kyonggi University, Suwon 16277, Republic of Korea)
  • 전가영(한국해양과학기술원 해 양생태연구센터) | Ga Yeong Jeon (Marine Ecosystem Research Center, Korea Institute of Ocean Science & Technology, Busan 49111, Republic of Korea)
  • 이옥민(경기대학교 생명과학과) | Ok-Min Lee (Department of Life Science, College of Natural Science, Kyonggi University, Suwon 16277, Republic of Korea) Corresponding author
  • 양은찬(한국해양과학기술원 해양생태연구센터, 국가연구소대학교 해양과학과) | Eun Chan Yang (Marine Ecosystem Research Center, Korea Institute of Ocean Science & Technology, Busan 49111, Republic of Korea, Department of Ocean Science, Korea National University of Science and Technology, Daejeon 34113, Republic of Korea) Corresponding author