The larvicidal activities of 11 Myrtaceae essential oils and their components against Aedes aegypti were tested by the immersion method. We also tested the acute toxicity of 4 active oils and their components against the water flea, Daphnia magna. Further, the aqueous residues of these oils and their components were determined at 2 and 7 days after suspending in water. Among the 11 oils tested, 0.1 mg/mL of Melaleucalinariifolia, M. dissitiflora, M. quinquenervia, and Eucalyptus globulus oils showed strong larvicidal activity against A. aegypti. Among the test compounds, allyl isothiocyanate, γ-terpinene, p-cymene, (+)-limonene, (-)-limonene, γ-terpinene, and (E)-nerolidol showed strong larvicidal activity against A. aegypti. The acute toxicity test revealed M. linariifolia was the most toxic to D. magna. Among test compounds, allyl isothiocyanate was the most toxic to D. magna. Two days after treatment, the residues of M. dissitiflora, M. linariifolia, M. quinquenervia, and E. globulus oils in water were 55.4, 46.6, 32.4, and 14.8%, respectively. Low concentrations of allyl isothiocyanate, γ -terpinene, p-cymene, (-)-limonene, (+)-limonene, and γ-terpinene were detected in the water at 2 days after treatment. Therefore, Myrtaceae essential oils and their components could be developed as control agents against mosquito larvae.