In the research-oriented university there are various laboratories in the departments according to a major field of study. Under these circumstances the budget to purchase experimental equipments has only to be distributed among research teams and then is spent within the confines of it without rein. However, in case of college the budget for experimental equipments needs to be considered other allocation methods because of no laboratory being managed by professor. In this paper the methodology for the rational operation of experimental equipments for college is proposed. It is composed of the following ; (1) the rational allocation method of the budget for experimental equipments in consideration of the characteristics of individual departments, and (2) the evaluation and selection of the alternative experimental equipments submitting in each department. First of all, the proposed methods are presented and then discussed with simulation results.