Important medical radionuclides for Positron Emission Tomography (PET) are producing using cyclotrons. There are about 1,200 PET cyclotrons operated in 95 countries based upon IAEA database (2020). Besides, including PET cyclotrons, demands for particle accelerators are continuously increasing. In Korea, about 40 PET cyclotrons are in operating phases (2020). Considering design lifetime (about 30-40 years) and actual operating duration (about 20-30 years) of cyclotrons, there will be demands for decommissioning cyclotron facilities in the near future. PET cyclotron produces radionuclides by irradiating accelerated charged particles to the targets. During this phase, nuclear reactions (18O(p,n)18F etc.) produce secondary neutrons which induce neutron activation of accelerator itself as well as surrounding infrastructures (the ancillary subsystems, peripheral equipment, concrete walls etc.). Generally, experienced cyclotron personnel prefer an unshielded cyclotron because of the repair and maintenance time. In unshielded cyclotron, water cooling systems, air compressor, and other equipment and structures could be existed for operating purposes. Almost all the equipment and structures are consisted of steel, and these affect neutron distribution in vault especially thermal neutron on the concrete wall. In addition, most of them can be classified as very low level radioactive wastes by Nuclear Safety and Security notice (NSSC Notice No. 2020-6). However, few studies were estimating radioactivity concentrations (Bq/g) of surrounding structures using mathematical calculation/simulation codes, and they were not evaluating the effect of surrounding structures on neutron distribution. In this study, by using computational neutron transport code (MCNP 6.2), and source term calculation code (FISPACT- II), we evaluated effect of the interaction between surrounding structures (including surrounding equipment) and secondary neutrons. Discrepancies of activation distribution on/in concrete wall will be occur depending on thickness of structure, distance between structures and walls, and consideration of interaction between structures and neutrons. Throughout this study, we could find that the influence of those structures can affect neutron distribution in concrete walls even if, thickness of the structure was small. For estimating activation distribution in unshielded cyclotron vault more precisely, not only considering cyclotron components and geometry of target, but also, considering surrounding structures will be much more helpful.