Community composition and abundance of aquatic invertebrates are important for ecological functions. Community characteristics of insects and gastropods were compared in five regions to investigate the effect of geological factors in surveys conducted between June and August to analyze seasonal changes in invertebrate communities. Underwater traps were used to obtain a constant collection effect. Insect communities were dominated by Hydrochara affinis, Rhantus suturalis and Sigara nigroventralis, and nMDS analysis demonstrated the separation of their communities by region. H. affinis and Sternolophus rufipes were not found in Haenam and Cheolwon, respectively. The results showed the effects of regional temperature on the distribution of aquatic insects. Pomacea canaliculata, Hippeutis cantori and Austropeplea ollula were dominant in the gastropod community. The seasonal variation in the abundance of P. canaliculata was the most pronounced, and its abundance in August was 38.2 times higher than in June. The abundances of several species including Hippeutis cantori were negatively correlated with that of P. canaliculata. These results suggest that P. canaliculata is a pivotal factor that drives seasonal changes in gastropod community.