Reballasting at sea, as recommended by the IMO guidelines, currently provides the best-available measure to reduce the risk of transfer of harmful aquatic organisms, but is subject to serious ship-safety limits. It is therefore extremely important that alternative, effective ballast water management and treatment methods are developed as soon as possible, to replace reballasting at sea. Filtration-Ultraviolet radiation-Electrolytic process (FUE) was evaluated for disinfection of seawater used In ballast water Optimal current density and UV light intensity were 2.0A/dm2 and, 220㎼/ cm2/m with which 100% reduction time was 2sec in a Ultraviolet radiation-Electrolytic process. This study showed that FUE process was effective for the disinfection of commonly isolated bacteria and bacillus from ballast water.