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Transcription Factor for Gene Function Analysis in Maize

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한국작물학회지 (Korean Journal of Crop Science)
한국작물학회 (Korean Society Of Crop Science)
초록

Transcription factors are essential for the regulation of gene expression in plant. They are binding to either enhancer or promoter region of DNA adjacent to the gene and are related to basal transcription regulation, differential enhancement of transcription, development, response to intercellular signals or environment, and cell cycle control. The mechanism in controlling gene expression of transcription can be understood through the assessment of the complete sequence for the maize genome. It is possible that the maize genome encodes 4,000 or more transcription factors because it has undergone whole duplication in the past. Previously, several transcription factors of maize have been characterized. In this review article, the transcription factors were selected using Pfam database, including many family members in comparison with other family and listed as follows: ABI3 / VP1, AP2/EREBP, ARF, ARID, AS2, Aux/IAA, BES1, bHLH, bZIP, C2C2-CO-like, C2C2-Dof, C2C2-GATA, C2C2- YABBY, C2H2, E2F/DP, FHA, GARP-ARR-B, GeBP, GRAS, HMG, HSF, MADS, MYB, MYB-related, NAC, PHD, and WRKY family. For analyzing motifs, each amino acid sequence has been aligned with ClustalW and the conserved sequence was shown by sequence logo. This review article will contribute to further study of molecular biological analysis and breeding using the transcription factor of maize as a strategy for selecting target gene.

목차
ABSTRACT
 Abscisic Acid-Insensitive 3 (ABI3) / Viviparous 1(VP1)
 APETALA2 (AP2) / Ethylene-Responsive Element Binding Proteins (EREBPs)
 Auxin-Response Factors (ARFs)
 AT-Rich Interaction Domain (ARID)
 ASYMMETRIC LEAVES2 (AS2)
 Auxin (Aux)/ Indole-3-Acetic Acid (IAA)
 BRI1-EMS-SUPPRESSOR 1 (BES1)
 basic/Helix-Loop-Helix (bHLH)
 basic Leucine Zipper (bZIP)
 C2C2-CO(CONSTANS)-like
 C2C2-Dof (DNA binding with one finger)
 C2C2-GATA
 C2C2-YABBY
 C2H2
 E2F/Differentiation Regulated Transcription Factor Protein (DP)
 FHA (forkhead-associated)
 Golgi Associated Retrograde Protein-Type B Phos-Phoaccepting Response Regulator (GARP-ARR-B)
 GLABROUS1 Enhancer-Binding Protein (GeBP)
 GRAS
 HMG (High-Mobility-Group)
 HSF (Heat Shock Transcription Factor)
 MADS
 MYB (Myeloblastosis)
 MYB-related
 NAC
 Plant Homeodomain Finger (PHD)
 WRKY
 적 요
 사 사
 인용문헌(REFERENCES)
저자
  • 문준철( 강원대학교 농업생명과학연구원 ) | Jun-Cheol Moon ( Agriculture and Life Sciences Research Institute, Kangwon Nat’l Univ., Chuncheon 200-701, Korea )
  • 김재윤( 고려대학교 생명과학대학 생명공학부 ) | Jae Yoon Kim ( College of Life Science and Biotechnology, Korea Univ., Seoul 136-713, Korea )
  • 백성범( 농촌진흥청 국립식량과학원 ) | Seong-Bum Baek ( National Institute of Crop Science, RDA, Suwon 441-837, Korea )
  • 권영업( 농촌진흥청 국립식량과학원 ) | Young-Up Kwon ( National Institute of Crop Science, RDA, Suwon 441-837, Korea )
  • 송기태( 동국대학교 생명과학과 ) | Kitae Song ( Plant Molecular Genetic Lab., Dep. Of Life Science, Dongguk Univ.-Seoul, Seoul 100-715, Korea )
  • 이병무( 동국대학교 생명과학과 ) | Byung-Moo Lee ( Plant Molecular Genetic Lab., Dep. Of Life Science, Dongguk Univ.-Seoul, Seoul 100-715, Korea ) Corresponding author