The streams in Jeju Island have very distinctive hydrological and geological properties and there are a lot of limits in applying the general flood estimation method. This study presented parameters dominant in the Hancheon stream of Jeju Island by analyzing the sensitivity of parameters of HEC-HMS model regarding rainfall events in the target basin, and extracted the optimal parameter(Time of Concentration of Clark Unit Hydrograph: KravenⅡ method, Storage Coefficient: Sabol method) by analyzing and comparing it with the flood runoff data observed in the site and Jeju Island's observation data.