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Random amplified polymorphic DNA와 fluorescent amplified fragment Length polymorphism 분석을 통한 Salmonella spp. 의 유전형 분석 KCI 등재

Genotyping of Salmonella spp. by random amplified polymorphic DNA and fluorescent amplified fragment Length polymorphism analysis

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예방수의학회지 (Journal of Preventive Veterinary Medicine)
한국예방수의학회(구 한국수의공중보건학회) (The Korean Society of Preventive Veterinary Medicine)
초록

Random amplified polymorphic DNA (RAPD) and fluorescent amplified fragment length polymorphism (FAFLP) analyses were executed on a total of 28 Salmonella spp., including 6 ATCC reference strains, 2 isolates from outbreaks of food poisoning in Gwangju, and 20 isolates from carcasses. For RAPD analysis, four primers, named P1254, 23L, OPA-4, OPB-17 were used producing amplification fragments ranged from 0.18kb to 2.6kb. As a result, 5 types using P1254, 5 types using 23L, 3 types using OPA-4, and 6 types using OPB-17 and a total of 18 RAPD types were achieved. For FAFLP analysis, bacterial genomic DNA was digested with endonucleases EcoRⅠ and MseⅠ, site-specific adaptors were ligated, and PCR amplification was carried out with an EcoR1 adaptor-specific primer labelled with fluorescent dye. Amplified fragments, which were separated on a polyacrylamide sequencing gel ranged from 35bp to 300bp were analysed. Results were displayed as a dendrogram with genetic distance. Twenty two Salmonella isolates and 6 reference strains were divided into 14 groups in a level of 0.136 genetic distance. In conclusion, Salmonella isolates of chicken carcasses have different genetic properties when compared to reference strains and isolates from outbreak of food poisoning.

목차
ABSTRACT
 서 론
 재료 및 방법
  1. 시험 균주
  2. 균 배양 및 Genomic DNA 추출
  3. RAPD를 위한 Primers, PCR 및 분석
  4. FAFLP를 위한 Enzyme restriction과 ligation
  5. FAFLP를 위한 Pre-selective와 Selective PCR
  6. 310 Genetic Analyzer를 이용하여 FAFLP의 DNA 단편의 분석
 결 과
  1. RAPD
  2. FAFLP
 고 찰
 참고문헌
저자
  • 박신정(전라남도 생물의약연구센터) | Sin Jeong Park (Jeonnam Biopharmaceutical Research Center)
  • 이재일(전남대학교 수의학과대학) | Jae Il Lee (College of Veterinary Medicine, Chonnam National University) Correspondence