Medical cyclotrons have been used for dedicated medical of commercial applications such as positron emission tomography (PET) for the past tens of years. These cyclotron facilities have produced positron-emitting radionuclides (i.e. 11C, 13N, 15O, 18F, etc.). Among them, 18F, produced by 18O(p,n)18F reaction is the most widely used which has longer half-life (around 110 m) and lower energy of emitted positrons (around 0.63 MeV). Secondary neutrons produced during 18O(p,n)18F reaction could cause neutron activation of structures, systems, and components of cyclotron facilities. Therefore, International Atomic Energy Agency (IAEA) had addressed that during the operation of cyclotrons, concrete walls become radioactive over time and this radioactivity needs to be characterized for planning of the facility decommissioning. Moreover, several prior studies had estimated the neutron activation and levels of radioactivity of concrete wall of cyclotron facilities. Although those studies assessed the neutron activation of actual cyclotron facilities, however, the purpose of assessment was only for decommissioning each individual facility. Also, the assumptions, conditions or insights of conclusion may be limited to each individual case. For these reasons, this study focused on analysis of effects of major factors (e.g. concrete type, impurity contents of structural materials, etc.) about neutron activation of cyclotron facilities. In this study, the well-known methodology of neutron activation estimation was established and neutron activation products of concrete wall of cyclotron vault was calculated. Also, sensitivity analyses were conducted to figure out the effects of major factors of neutron activation and production of radioactive wastes during decommissioning of the facility. The methodology and results were validated by two steps: comparing with prior studies and comparing with another computer code. Concrete type did not affect that the decision of level of radioactivity waste criteria. Because of relatively longer half-lives, impurity contents of structural materials especially Co and Eu were turned out one of the most important factors for planning the facility decommissioning. It is hard to simply figure out the radioactivity levels of cyclotron facilities, however, rough predictions of minimum period for decay-in-storage as radioactive waste management can be possible with using information of thermal neutron spectra and major impurity nuclides (e.g. 59Co, 151Eu and 153Eu) for minimization of radioactive waste production and relief of charge of radioactive waste management.