Uranium isotopes (238U, 235U, and 234U) found in natural environments and their activity ratios (235U/238U and 234U/238U) have been used as an important tool in investigating various geological processes, especially in natural analogue studies. Occurrence and fractionation of uranium isotopes in nature between 238U, 235U, and 234U were investigated. Various measurement methods have been used for the determination of isotopic ratios and geochronology. Thus, we reviewed and summarized the measurement methods such as alpha spectrometry, gamma spectrometry, thermal ionization mass spectrometry (TIMS), secondary ion mass spectrometry (SIMS) with sensitive high resolution ion microprobe (SHRIMP), and multiple-collector inductively coupled plasma mass spectrometry (MCICPMS). Research status of natural analogue studies carried out using uranium isotopes and their isotopic ratios were also reviewed and summarized in terms of long-term behaviors of radionuclides in various foreign uranium deposits as analogues of high-level radioactive waste repositories. Research results for mineralogical, geochemical, and biogeochemical behaviors of uranium in various natural analogue sites were collected and analyzed to investigate the migration and retardation processes of uranium through geological media. These long-term behaviors of uranium and uranium isotopes include dissolution/precipitation of uranium minerals, interactions of uranium with various fracture minerals including sorption and incorporation, redox reactions by minerals and microbes, and hydrological groundwater flow thorough rock fracture systems including identification of flow paths and groundwater circulation. The results of this study will contribute to performing future natural analogue studies in domestic uranium deposits and provide basic information and knowledge for understanding long-term geochemical and geochronological behaviors of radionuclides in a high-level radioactive repository.