Infectious diseases in domestic animals of carcase were increasing every year. According to the monthly report for infectious disease from Ministry for Food, Agriculture, Forestry and Fisheries, 11,954 heads of cattle, 518,178 heads of pig, 232,850,244 heads of bird were reported in 2011. Infectious diseases of carcase almost spread on a national scale. Dead or emergency preventive carcase are completely treated on bury. Since the treatment of carcase on bury are generating soil, underground water and source water pollution, introduction of new preventive system should be considered. In this study, literature survey and case studies to prevent the spreading of virus for infectious disease and second environmental pollution were investigated. The actual experiments using the existing incineration facilities were also performed to ensure the possibilities of safe treatment of carcase. On the other hand, the moving-type incineration are also being developed and its operation manual will be prepared. Among the investigated incinerators, stoker type incinerator was not suitable for the treatment of carcase, however, other incinerators such as fluidized-bed type incinerator, rotary kiln type incinerator ware shown to be suitable. But even for the stoker type incinerator, if the pre-treatment facilities( grinding, crushing) are installed, it will also be a suitable method. The analytical results for air pollutants(including dioxin) emitted from the final exit were all satisfied to the air pollution emission standards.