In this study, static and dynamic analysis verification was performed to apply the fuel cell system to the E-PTO of the Wire aerial vehicle. First, structural analysis was performed to improve the weak points that occurred. Next, vibration analysis was performed on the fuel cell system for which structural safety review was completed according to the wide-band irregular vibration test standard. The analysis results showed that resonance occurred in a specific frequency band and local stress was high, so stiffness reinforcement was performed. After reinforcing the stiffness, stress was reduced through a decrease in transient response characteristics and resonance phenomenon.