The integrative approach for ecological stream health assessments was applied to a stream ecosystem using a multi-level organization from molecular level of biomarkers to community levels of bioindicators along with analysis of physical and chemical stressors. Water quality parameters of BOD, COD, TN, and TP etc were measured and physical habitat health, based on Qualitative habitat Evaluation Index (QHEI) model were analyzed. Also, Ecological stream health model, based on index of biological integrity (IBI) by fish assemblage, was developed for regional assessments and then applied to the stream. Six metric attributes of original 11 metrics were modified for a development of the model. Biomarkers of comet assay, blood chemistry, physiological parameters, and bioindicators such as organismal-, population-, community- level parameters were evaluated in this study along with eco-toxicity tests. Some stations impaired (stressed) in terms of stream health were identified by the IBI approach and also major key stressors affecting the health were identified using BOD, TN, TP, physical habitat evaluation, and eco-toxicity tests. The assessment approach of integrative ecological stream health would be used as a key tool for ecological restorations and species conservations in the degraded stream ecosystems and applied for elucidating major causes of ecological disturbances. Ultimately, this approach provides us an effective management strategy of stream ecosystems through establishments of ecological networks in various watersheds. This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (No. 2013R1A1A4A01012939).

Capsinoids, low-pungent compounds, have the same biological effects as capsaicinoids such as anticancer and anti-obesity. A precursor of capsinoids, vanillyl alcohol, is known to be produced by mutations in the putative-aminotransferase (pAMT) gene. In the previous study, ‘SNU11-001’ (Capsicum chinense) containing high levels of capsinoids was identified in germplasm collections of Capsicum. This collection has a unique mutation in the pAMT gene that can cause dysfunction of this gene. In order to develop pepper varieties containing high capsinoids contents, marker-assisted foreground and background selections were performed during backcross breeding. Compared to the conventional backcrossing, marker-assisted backcrossing (MABC) is extremely useful for recovery of a recurrent parent’s genetic background. For foreground selection, plants carrying the pAMT/pamt genotype were selected from a BC1F1 and BC2F1 populations using SCAR markers derived from the unique pAMT mutation of ‘SNU11-001’. To obtain background selection markers, a total of 412 single nucleotide polymorphism (SNP) markers was screened on ‘Shinghong’ parental lines and ‘SNU11-001’ to obtain polymorphic SNP markers. Of the 412 SNP markers, 144 and 204 polymorphic SNP markers evenly distributed in pepper genome were finally selected. BC1F1 and BC2F1 plants carrying the pAMT/pamt genotype were subjected to background selection using the selected marker sets. Multiple genotype analysis was done using a high-throughput genotyping system (EP1TM, Fluidigm®, USA). As a result, one BC1F1 plant 84% similar to the recurrent parent and several BC2F1 plants more than 96% recovery rate of the recurrent parent were selected. Genetic backgrounds of the selected BC2F1 plants were evaluated by the genotype-by-sequencing (GBS) method in order to confirm the background selection results using the SNP marker set. GBS results showed that recovery rate and positions of introgressed segments were well matched between two methods demonstrating MABC can be successfully done with a couple hundred SNP markers.