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A Systematic Proteome Study of Seed Storage Proteins from Two Soybean Genotypes KCI 등재

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한국작물학회지 (Korean Journal of Crop Science)
한국작물학회 (Korean Society Of Crop Science)
초록

Soybean seed is a good source of plant protein in human consumables such as baby formula and protein concentrate. The seeds contain an abundance of storage proteins, namely β-conglycin and glycinin that account for ~ 70-80% of the total seed protein content. Proteome profiling has been proved to be an efficient way that can help us to investigate the seed storage proteins. In the present study, the seeds were removed from the pods and the cotylendonary tissues were separated from the testa for proteome analysis in order to investigate the seed storage proteins. A systematic proteome profiling was conducted through one-dimensional gel electrophoresis followed by MALDI-TOF-TOF mass spectrometry in the seeds (cotyledonary tissue) of soybean genotypes. Two dimensional gels stained with CBB, a total of 10 proteins were identified and analyzed using MASCOT search engine according to the similarity of sequences with previously characterized proteins along with the UniProt database. A total of ten proteins such as glycinin Gy4 precursor, glycinin G3 precursor, glycinin G1 precursor, glycinin chain A2B1a precursor, glycinin chain A2B1a precursor were identified in our investigation. However, the glycinin subunit may be considered to play important roles in soybean breeding and biochemical characterization. In addition, the improved technique will be useful to dissect the genetic control of glycinin expression in soybean.

목차
ABSTRACT
 MATERIALS AND METHODS
  Plant materials and sample preparation
  Two-dimensional gel electrophoresis
  Protein visualization and image analysis
  In-gel digestion
  Mass spectrometry (MALDI-TOF-TOF/MS) analysis
  Bioinformatics
 RESULTS AND DISCUSSION
  Optimization of basic proteins by 2-D gel electrophoresis
  Identification of subunit of the soybean cotyledon proteins
 ACKNOWLEDGMENTS
 REFERENCES
저자
  • Sun Hee Woo( Department of Crop Science, Chungbuk National University, Cheong-ju 361-763, Korea; ) Corresponding author
  • Chul-Won Lee( Department of Crop Science, Chungbuk National University, Cheong-ju 361-763, Korea; )
  • Hong-Sig Kim( Department of Crop Science, Chungbuk National University, Cheong-ju 361-763, Korea; )
  • Swapan Kumar Roy( Department of Crop Science, Chungbuk National University, Cheong-ju 361-763, Korea; )
  • Soo-Jeong Kwon( Department of Crop Science, Chungbuk National University, Cheong-ju 361-763, Korea; )
  • Seong-Woo Cho( Rice Research Division, National Institute of Crop Science, RDA, Suwon 441-857, Korea )