Scabies, caused by an infestation of the skin with the itch mite (Sarcoptes scabiei), is highly contagious and classified as a prevalent neglected tropical diseases. The current diagnostic approach relies solely on clinical judgment based on symptoms, history, and microscopic observation by an experienced dermatologist. To enhance sensitivity and specificity, we developed an alternative method based on mite-derived DNA. Our method involves a quick DNA release from skin scraping samples and Loop-Mediated Isothermal Amplification (LAMP) targeting the scabies mite-specific DNA sequences, enabling diagnosis within 30 minutes. Importantly, no cross-reactivity was observed when the sample was contaminated by two house dust mite species, and false positives were barely detected. Currently, we are in the process of developing a Point-of-Care Testing (POCT) kit for a scabies survey targeting school-age children in Timor-Leste as a global health project.
The recent increase in the occurrence of common bed bug and tropical bed bug in shared areas highlights the need for rapid species identification at infestation sites, which is crucial for implementing targeted control measures due to differences in genetic and physiological traits. In this study, molecular diagnostic methods were developed using species-specific ITS2 sequences. Both multiplex PCR and loop-mediated isothermal amplification (LAMP) protocols with a DNA release method successfully distinguished between the two bed bug species regardless of developmental stages in 0.5~2.5 hours, even with dead specimens. Especially, LAMP's simplicity and speed make it applicable for rapid and accurate bed bug diagnosis at infestation sites.
Parasites have co-evolved with their host for a long period of time, resulting in unique parasitic systems tailored to each host species. This makes them suitable for research on physiological function control through cross-species molecules like miRNA. The body louse, a vector of bacterial pathogens, is particularly valuable as a model insect due to their frequent feeding on human blood, which results in the continuous ingestion of human-derived miRNA and injection of salivary gland-derived miRNA into the human body. In this study, we conducted miRNA sequencing on body lice with mixed stages and identified 105 miRNAs, including 50 novel miRNAs. Sequence analysis of human miRNAs remaining in body lice and the functional analysis of these miRNAs are in progress.
본 연구는 검거세미밤나방(Agrotis ipsilon) 성페로몬 트랩에 혼재하여 유살되는 은무늬밤나방아과 형태적 분류와 동정법 수립을 위해, 날개 무늬의 형태계측학 분석을 실시하였다. 은무늬밤나방아과 개체는 2023년 11월 부터 12월까지 제주도 애월읍 일대에서 채집되었으며, 콩 해충으로 알려진 콩은무늬밤나방(Ctenoplusia agnata) 을 비롯하여, 다양한 농작물을 가해하는 것으로 알려진 붉은금무늬밤나방(Chrysodeixis eriosoma)의 수컷 성충이 포획되었다. 앞날개의 형태 및 무늬를 가지고 현장에서 쉽게 동정할 수 있는 형태적 특징을 도출하기 위하여, 각 성충 개체의 앞날개를 잘라 현미경 카메라로 촬영하고, 앞날개의 내횡선, 아외연선, 반점 크기 등 15개의 형질 을 측정하였다. 또한 각 형질 간의 상관관계를 분석하였으며 빈도분포를 통하여 두 종간 분리되는 형질을 파악하 였다. 최종적으로 다변량 분석법을 적용하여 두 집단이 어떻게 군집을 이루는지 분석하고, 날개형태만으로 붉은 금무늬밤나방과 콩은무늬밤나방을 구분할 수 있는 방안을 제시하였다.
Fall armyworm (FAW, Spodoptera frugiperda) is a major pest worldwide, and since its first domestic invasion was confirmed in 2019, its damage has been steadily increasing in crops such as corn until recently. In order to provide basic data for the management of FAW, we conducted a comparison of host preference and nutritional composition analysis of corn varieties. A total of 12 varieties of corn were selected for the experiment. To investigate the preference among the varieties, we examined the host preferences at the population level and the individual level, and found no statistically significant differences. In the population-level experiment, the highest damage rate was observed for Saekso 4 and the lowest for Heukgeom 2. In the individual-level experiment, the highest damage rate was found for Kangilok and the lowest for Oryun 2 when using leaves, and the highest for Saekso 1 and the lowest for Dreamok when using stems. As a result, the population-level and individual-level results were not consistent, suggesting that FAW's corn variety preference is not clear and may vary depending on various conditions such as corn tissue. Composition analysis of the 12 varieties showed no correlation between composition and FAW preference among the varieties, and considering the feeding behavior of FAW, which are highly polyphagous, it is recommended to control FAW as early as possible to improve control effectiveness.
Tropilaelaps mercedesae Anderson and Morgan, 2007 (Acari: Laelapidae) is a serious ectoparasite of the brood of several honey bee species. Among the four recognized species of Tropilaelaps, Korean population was renamed as T. mercedesae from T. clareae on the basis of morphological evidences and genetic data. In this study, we report the complete mitochondrial genome (mitogenome) sequence of T. mercedesae. The 15,119-bp long mitogenome has an identical gene arrangement to that of Chinese sample reported previously. Comparison of two geographic samples showed COII, ND5, ND4, ND6, CytB, and ND1 to have higher number of variable sites than COI, which is often used for population-level study, suggesting these genes to have potential usefulness for population genetic study. The mitogenome sequence of T. mercedesae from Korea could be useful for species identification for geographic samples, trace of the origin of local populations, and illustration of evolutionary distinction among Tropilaelaps species either using part of or whole genome.
Vespa binghami (Hymenoptera: Vespidae) is one of the 10 species in the genus Vespa distributed in South Korea and is the only nocturnal wasp. In this study, we sequenced complete mitochondrial genome (mitogenome) of the species using the Sanger method and using Vespa-specific 30 primer sets. The length of V. binghami was 15,957 bp and the total A/T content was 80.6%. The A+T-rich region of V. binghami was 152 bp, and other Vespa species ranged from 39 bp (V. velutina) to 2,230 bp (V. v. auraria). Compared to the majority of insects, the gene arrangement of V. binghami had differences as followings: trnY-trnI-trnM-trnQ, trnN-trnE-trnS1-trnF, and trnS2-trnL1. However, all species in the genus Vespa registered in GenBank to date were composed of the same arrangement. Phylogenetic analysis using 13 PCGs and 2 rRNA genes showed the sister relationship between V. binghami and V. orientalis with the higher nodal supports.
전북특별자치도 수박(Citrullus lanatus (Thumb.) Matsum. et Nakai) 재배면적은 2,235ha이며, 익산과 정읍은 주요 수박 재배 지역이다. 본 연구는 수박에서 발생하는 해충 목록 작성을 위한 기초자료 구축 을 목적으로 최근 20년간 보고된 문헌자료를 조사하였다. 문헌조사에 따르면, 수박에서 발생하는 주요 해충은 총 7목, 11과, 22종으로 정리되었다. 이 중 점박이응애(Tetranychus urticae Koch), 목화진딧 물(Aphis gossypii Glover), 아메리카잎굴파리(Liriomyza trifolii Burgess) 등이 우점해충으로 다수의 문헌 을 통해 확인되었다. 그 외 파밤나방(Spodoptera exigua Hübner), 꽃노랑총채벌레(Frankliniella occidentalis Pergande), 목화바둑명나방(Diaphania indica Saunder)등의 해충들이 최근 연구로부터 추가되었다. 본 연구 결과를 기반으로 앞으로 수박 해충에 대한 현장 조사 계획을 수립하고, 적합한 방제 전략을 세우 고자 한다.
Vietnam is a country in Southeast Asia, long from north to south, with temperate, subtropical, and tropical climates in different parts of the country. Based on the results of two years of insect surveys in the subtropical and tropical regions of Vietnam, we conducted a comparative analysis of the species diversity of the Noctuoidea (Insecta: Lepidoptera) in the two survey areas, Bach Ma National Park and Protected Forest in the Vạn Xuân region. In addition, the host flora of the identified moths were analysed to determine the differences in host communities.
Eriocraniidae is a microleidopteran family (Lepidoptera: Eriocraniidae) that includes six genera and distributed to the Holarctic region. The larvae of this family are known leaf miners, typically infesting Betula and Ouercus. Herein. the first reord of the genus Dyeriocrania Spuler, 1910 in Korea is presented, including the previously undscribed species. Adult and female genitalia are provided based on illustrations.
The genus Acronicta Ochsenheimer, 1816 is known as a forest pest. The acronictine species is widely distributed across the Afrotropical, Oriental, Australian, and Neartic regions. This study presents a new record of an acronictine species from Korea, including descriptions, illustrations, and diagnostic characteristics. Additionally, the CO1 barcode data of the newly recorded species is compared with the global barcode reference at the species level. New data on the recently recorded species has been obtained from this study. This information will aid in the prompt identification and preparation for potential pest outbreaks.
Stathmopodidae, in the superfamily Gelechioidea, was first described by Edward Meyrick in 1913. This family has various characteristics, such as feeding on crops, moss, spores of fern, aphids, etc., but there is a lot of difficulty in identification due to morphological similarities between species. Therefore, it is necessary to understand the genitalia structure through dissection, but this process necessarily involves damage to the type specimen. To solve these problems, Micro-CT(Computed Tomography) which allows observation of internal structures without damage, was utilized to create a 3D model of the genitalia. In this study, the genitalia structure of Stathmopoda pedella (Linnaeus, 1761), the type species of Stathmopodidae, was imaged using Micro-CT under a resolution of 4 um conditions, providing a 3D description.
Six mosquito species in the Anopheles Hyrcanus group are known as vectors responsible for transmitting vivax malaria in South Korea. In this study, seasonal dynamics of Anopheles Hyrcanus group species and knockdown resistance (kdr) mutations in malaria-endemic sites, Paju and Gimpo, were monitored over two years. In August 2023, all six species were observed simultaneously in one of the Paju collecting sites, and kdr mutations were newly identified in all species except Anopheles kleini. Although Anopheles pullus was revealed as a relatively resistant species among five species populations without kdr mutation via bioassays, there were no critical differences in the voltage-sensitive sodium channel sequence. These findings suggest variability in pyrethroid resistance mechanisms among Anopheles Hyrcanus Group species.
From invertebrate to vertebrate, females uptake sperm for a specific duration post-copulation known as the ejaculate holding period (EHP) before expelling un-stored sperm and the mating plug through sperm ejection. Our study uncovered that encountering males or mated females after mating substantially shortens EHP, a phenomenon we term ‘male-induced EHP shortening (MIES)’. MIES requires Or47b+ olfactory and ppk23+ gustatory neurons, activated by 2-methyltetracosane and 7-tricosene, respectively. These odorants raise cAMP levels in pC1b and c neurons, which are responsible for processing male courtship and regulating female receptivity. Elevated cAMP levels in pC1b and c reduce EHP and reinstate their responsiveness to male courtship cues, promoting re-mating with faster sperm ejection. This study establishes MIES as a genetically tractable model of sexual plasticity with a conserved neural mechanism.
동물의 종 유지에 있어서 교미행동은 매우 중요한 위치를 차지함. 교미과정에서 수컷의 경우 모든 암컷에 대해 성행동을 보이는반면, 암컷은 가장 적절한 교미의 시기를 정하며, 적절한 수컷을 선택하고 교미행동을 보이기 때문에 암컷의 교미행동을 유도하는 과정은 생물학에서 매우 중요한 의미를 지님. 본 연구에서는 초파리 (Drosophila melanogaster) 전자현미경자료와 총신경망분석 (Connectomics)을 이용하여 초파리 뇌에서 암컷의 교미행동을 조절하는 것으로 알려진 pC1신경의 하부신경 pC1b,c가 성적 성숙과정에서 교미를 하고자 하는 욕구 (sexual drive)를 증가시키는 기능을 하는 것을 처음으로 밝힘. 본 연구에서는 처음으로 pC1b,c 신경 내의 cAMP 수준이 교미의 욕구변화를 보여주는 중요한 물질이라는 것을 밝혔고 cAMP의 수준이 오르기 위해서는 신경펩티 드인 Dh44와 그 수용체 GPCR인 Dh44R1과 Dh44R2가 필요하다는 것을 확인함. 또한 cAMP의 변화는 신경내의 CREBB를 통하여 하위 유전자인 pyx (pyrexia)의 발현을 유도한다는 것을 밝힘. 본 연구로 종 유지 메커니즘을 좀 더 이해할 수 있음.
Chromosomal level of Korean Diadegma fenestrale (Jeju strain, JK-2023a) of genome assembly was achieved through a combined approach utilizing Nanopore long-read sequencing and Illumina NovaSeq short-read sequencing (approximately 217.2× coverage). The assembled genome spans 221.1 Mb, comprises 68 scaffolds, with most of the genome contained within 11 chromosomal level scaffolds. The completeness of the assembly is reflected in BUSCO assessment, with values reaching 99.6%. Scaffold N50 was 17.4 Mb, and GC % was 40%. RNAseq was performed using RNA extracted from larvae, pupae, and adults at various developmental stages (trimmed RNA-Seq data, 11.3 Gb), and a total of 13,544 genes were predicted by synthesizing the transcriptome information with the annotation information of five closely related species such as, Campoletis sonorensis (GCA_013761285.1), Venturia canescens (GCF_019457755.1), and Nasonia vitripennis (GCF_000002325.3, and GCF_009193385.2). Of these, 13,498 genes were identified by BLAST and are being further analyzed. Although the frequency of DfIV genome integration into the host’s 11 chromosomes varies from 0 to 32%, it was confirmed that all 62 DfIV genome fragments were inserted into the Hymenopteran host genome.
Over 350 species of Stathmopodidae have been reported worldwide, but due to their morphological similarities, there are many difficulties in species identification. To address these issues, various methods including larval, behavioral ecology, molecular techniques, and others have been utilized. In this study, we compared the resistance to pressure based on wing venation, which has not been extensively covered before, to further elucidate the differences between species. Type species, and one species from the genus reported in Korea, this study utilized Fusion 360 to create 3D models and visually represented resistance under the same pressure with colors. Colors derived from simulation results are extracted for trend analysis using PCA (Principal Component Analysis), and differences between groups formed through K-means clustering are analyzed.
Spelaeochthonius Morikawa, 1954, which comprises 11 species, is a genus in the family Pseudotyrannochthoniidae Beier, 1932. Members of this group can be represented by troglobitic characterisitics and narrow-range endemism. Three species are documented on the Korean Peninsula: Spelaeochthonius cheonsooi You, Yoo, Harms and Harvey, 2022; S. dentifer Morikawa, 1970; S. seungsookae You, Yoo, Harms & Harvey, 2022. In this study we utilize ten species, including three recorded Korean species, two Japanese species, and five new species, for molecular analysis. We employ four genes (COI, H3, 18S, 28S) commonly used in pseudoscorpions studies. This study aims to (i) identify the most specific gene for species identification in pseudoscorpions, (ii) demonstarate the narrow-range endemism of Spelaeochthonius, and (iii) explore the speciation pathway of this genus. Consequently, our understanding of biodiversity and necessity of species conservation.
The oriental fruit fly, Bactrocera dorsalis, is highly polyphagous pest that damages over 400 plant species, including commercially grown crops and fruits. It was first described in Taiwan and has since invaded Japan and China. In 2021, B. dorsalis was reported on Jeju Island in the Republic of Korea (ROK). To investigate its origin and understand its colonization pathway in ROK, the genetic characteristics were analyzed by using mitochondrial genes. The study analyzed the haplotypes and genetic differences among populations oriental fruit flies collected from Southeast Aisa, including Thailand, Taiwan, and Vietnam. The mitochondrial genes cytochrome oxidase subunit I (COI) and cytochrome B (CytB) were used for the analysis. The results showed that B. dorsalis had high levels of haplotype diversity among species. No major haplotype was found among populations. The present study enhances our understanding of the haplotype diversity of B. dorsalis in neighboring countries of ROK. This will expand our knowledge of the source of origin and invasive pathway for B. dorsalis.
Bombyx mandarina (Lepidoptera: Bombycidae), the presumed ancestor of the domesticated silkworm B. mori, has long been a subject of study to illustrate the geographic relationships in connection with origin of B. mori. We sequenced 100 mitochondrial genomes of B. mandarina collected from South Korea and Japan and these were combined with public data. Phylogenetic and population genetic analyses showed that all individuals collected in South Korea, except one individual from Inje, formed a strong group together with northern China and some individuals of southern China. This group was placed as the sister group to B. mori strains, suggesting that this group could have been served as an immediate progenitor for B. mori. For further robust inference more analysis is underway.