Background : Angelica gigas, also called Dang Gui or Korean Angelica, is a major medicinal herb used in Asian countries such as Korea, Japan and China. A. gigas has many active constituents such as dercursin, decursinol angelate, nodakenetin, nodakenin, β-sisterol or α -pinene. But, there is no research on the gexpression of the genes related to saponin biosynthesis from A. gigas. In this study, we compared the expression of saponin biosynthesis related genes from various organs of A. gigas. Methods and Results : The reads of Angelica gigas mRNAs were produced using Illumina Hiseq 2000, and the reads were assembled to produce 113,597 contigs using CLC　Genomic Workbench. To select the saponin biosynthesis genes, assembled contigs were subjected to BLAST analysis at NCBI site. RNAs were extracted from five tissues, roots, stems, flowers, old leaves and young leaves of A. gigas. We produced total of 16 gene specific primers and used for RT-PCR. PCR conditions composed pre-denaturation at 95℃ for 3min, then 35 cycles of 95℃ for 30 sec, 57℃ for 30sec and 72℃ for 1min, and a final extension at 72℃ for 5min. Electrophoresis performed at 100 V, 30 min using 1.2% gel. Our experiment shows that A. gigas has several genes related to saponin biosynthesis and the genes were expressed from variety of organs. Conclusion : From the above results, we may suggest A. gigas genes related to the biosynthesis of saponins.