We sequenced 15,803 bp of the leaf-rolling-weevil, Apoderus jekelii (Coleoptera: Attelabidae) mitochondrial genome (mitogenome) that lacked ~8,000 bp of the A+T-rich region for the completion of the genomic sequence. The A. jekelii mitogenome, which includes 1,169 bp of A+T-rich region, possesses typical sets of genes [13 protein-coding genes (PCGs), 22 tRNA genes, and 2 rRNA genes]. Phylogenetic analyses using the eight concatenated PCG sequences, which are commonly available for the mitogenome sequences of Curculionoidea, revealed Attelabidae as monophyletic, as well as the sister relationship between current A. jekelii and congeneric species A. coryli in Attelabidae, with the highest nodal supports both in Bayesian inference and maximum likelihood methods. In order to gain a more comprehensive picture of the phylogenetic relationships among the lineages of Attelabidae, an extended analysis with more taxonomic sampling will be necessary. †These authors contributed equally to this paper.

The complete mitochondrial genome of Ostrinia palustralis memnialis Walker, 1859 (Lepidoptera: Crambidae) was determined to be 15,246 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that observed in most lepidopteran genomes. The A+T content of the whole genome, PCGs, srRNA, lrRNA, tRNAs, and the A + T-rich region all are well within the range found in other Pyraloidea. Phylogenetic analyses of the concatenated sequences of the 13 PCGs using Bayesian inference and Maximum-likelihood methods placed O. palustralis as a sister group to O. furnacalis and O. nubilalis, with the highest nodal support. The subfamilies within Crambidae, such as Nymphulinae, Spilomelinae, and Pyraustinae, all formed monophyletic groups with the highest nodal support.

A genus Cryptaulus Ôhira (Coleoptera: Elateridae) includes 15 species in Palearctic region and two of them, C. berus (Candèze) and C. larvatus pini (Lewis), have been recorded from South Korea. Recently, a rare species of genus, C. yamato (Nakane) which is regarded as endemic to Japan, was newly discovered from Gwangneung forest, South Korea with a DNA barcode sequence (In press). As results of the present study, a complete mitochondrial DNA genome of Cryptalaus yamato (Nakane), is reported for the first time. The genome consists of 15,882 base pairs including 13 protein coding genes (PCGs), 20 tRNAs, two rRNAs and a 1,279 bp long AT-rich region. The overall base composition is 69.4% AT and 30.6% GC. The maximum likelihood analysis based on nucleotide sequence data of 13 PCGs supported that C. yamato is involved in monophyletic group of Elateridae.

In the present study, we make a first report on the complete mitochondrial DNA genome of Leptaulax koreanus, a Korean endemic species, in Passalidae. The mitogenome is 18,730 base pairs with 13 protein coding genes (PCGs), 22 tRNAs, two rRNAs and a 4240 bp long AT-rich region. The overall base composition is 78.4% AT and 21.6% GC. The maximum likelihood analysis inferred that L. koreanus is a sister to other Scarabaeoidea species. The phylogeny suggested that L. koreanus is the basal group of Scarabaeoidea.

The genus Camponotus Mayr, 1861 distributes all over the world, even ranging from the African desserts to the Antarctic islands. Number of species in this genus is the largest: 1,488 taxa (species and subspecies) accounting for 10% ant species. Despite of it, number of available complete mitochondrial genomes was only one, Camponotus atrox (subgenus Camponotus). To decipher characteristics of mitochondrial genome of this genus, we completed mitochondrial genomes of Camponotus nipponensis Santschi, 1937, belonging to subgenera Myrmentoma using Illumina HiSeqX. The total length of mitochondrial genome of C. nipponensis is 15,532bp with 79.8% A + T content. It consists of 13 PCGs, 22 tRNA, and 2 rRNA genes and an A+T–rich control region. This mitochondrial genome will be a useful resource to understand features of Camponotus genus with adding more mitochondrial genomes of other subgenera, such as Paramyrmamblys.

오이총채벌레(Thrips palmi Karny)는 동남아시아지역이 원산으로 국내 침입 외래해충이다. 주로 노지와 하우스에서 재배되는 박과(Cucurbitaceae)와 가지과(Solanaceae) 작물에 직접 섭식과 바이러스 매개에 의한 피해가 크다. 본 연구에서는 차세대염기서열분석기술(NGS)을 통해 오이총채벌레의 미토콘드리아 전장 게놈을 해독하였으며 염기서열 신규 조립(de novo assembly) 결과 전체 길이가 16,414bp인 원형의 유전체로 추정되었다. 미토콘드리아 게놈 전체에서 뉴클레오티드는 A와 T가 78.5%를 차지는 특징을 보였다. 동물의 미토콘드리아 게놈에서 일반적으로 발견되는 37개 유전자 영역에 대해 BLAST 검색을 한 결과 trnV는 탐색되지 않았다. 본 발표에서는 신규 조립된 오이총채벌레 미토콘드리아 게놈 유전체에 포함된 유전자의 종류와 배열 등에 대한 기초 통계자료를 정리하였다.

Bombyx mandarina (Lepidoptera: Bombycidae) is generally regarded as the ancestor of the domesticated B. mori. Recently, over 40 mitochondrial genomes (mitogenomes) mainly from B. mori strains preserved in China and wild individuals of B. mandarina were sequenced to verify the progenitor of B. mori. At this point, we also were curious about the origin and the relationships of Korean silkworms to foreign B. mandarina and B. mori. As a first step, we sequenced the complete mitogenome of the B. mandarina collected in Korea and compared it to pre-exsiting data (37 strains of B. mori and 14 individuals of B. mandarina). The complete mitogenome of B. mandarina was 15,694-bp long, consisted of 13 protein-coding genes, two rRNA genes, 22 tRNA genes and one non-coding region. The 494-bp long A+T-rich region possessed the highest A/T content (95.3%) than any other region of the genome. Overall, the general mitogenome characteristics of the genus Bombyx species have an identical gene arrangement, similar A/ T content (average 82.3%) and so on. Phylogenetic analysis, however, showed that B. mori and B. mandarina formed a distant group each with the highest nodal support. For more findings of mitogenome characteristics of Bombyx including the Korean B. mandarina and those preserved in Korea more mitogenomes, particularly from Korea, might be needed.

The dung beetle, Copris tripartitus, has been listed as an endangered insect in Korea. In contrast to typical genomic characteristics, the 15,457-bp long, the complete mitochondrial genome (mitogenome) of C. tripartitus has a few unusual characteristics. The genome has the trnP-trnT arrangement at the ND4L-ND6 junction, which is found only in two species of Scarabaeoidea, including C. tripartitus, in 53 available species. Twelve protein coding genes (PCGs) have typical ATT and ATG start codons, whereas COII had the start codon GTA, which is unprecedented in Scarabaeidae. The 297-bp A + T-rich region, which is the shortest available in Scarabaeidae, harbors three repeat units (26, 29, and 21 bp), each consisting of duplicated identical sequences interspersed in the A + T-rich region. Phylogenetic analyses were performed using the concatenated sequences of the 13 PCGs and two rRNA genes using both the Bayesian inference (BI) and maximum likelihood (ML) methods for the families Scarabaeidae and Lucanidae that are available for their mitogenomes in Scarabaeoidea. Our consensus phylogeny yielded monophylies of each family and the subfamily Scarabaeinae in Scarabaeidae with the high nodal supports (0.99-1 by BI and 79-100 by ML). Among the three tribes, represented by multiple genera in Scarabaeinae each Oniticellini and Onitini was supported as monophyletic groups with the highest nodal supports (1 by BI and 100 by ML), whereas Onthophagini was non-monophyletic group, presenting the tribe relationships: ((((Oniticellini + Onthophagini [Caccobius, Milichus, Onthophagus]) + Onthophagini [Digitonthophagus, Phalops]) + Onitini) + (Phanaeini + Eurysternini) + Coprini).

Currently, phylogenetic relationships of Bombycoidea have been reconstructed using molecular data, but generated several hypotheses on among-familial relationships [(especially, “Satruniidae+Bombycidae+Sphingidae” group)] within Bombycoidea. Thus, in this study, we sequenced 39 mitogenomes from both Bombycoidea and Lasiocampoidea. Consequently, one topology was obtained on the basis of ML and BI methods. It suggested the monophyly of the two superfamilies (Bombycoidea and Lasiocampoidea) consistently with a high nodal support; the sister relationship between Saturniidae and Sphingidae in “SBS”; and the sister relationships between Bombycidae and the Saturniidae + Sphingidae group.

The Acoptolabrus changeonleei Ishikawa et Kim, 1983 (Coleoptera: Carabidae), has been listed as an endangered insect in South Korea. The complete mitochondrial genome of the species was 16,831 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with the arrangement identical to that observed in most insect genomes. Phylogenetic analyses with concatenated sequences of the 13 PCGs and 2 rRNA genes, using the Bayesian inference (BI) and maximum-likelihood (ML) methods, placed A. changeonleei as a sister to the within-subfamilial species Damaster mirabilissimus in Carabinae, with the highest nodal support by both analyses.