최근 우리나라 연안에서 출현빈도가 점차 늘어나고 있는 침편모조류에 속하는 Chattonella는 대표적인 유해조류 중 하나로, 이들 종은 세포벽이 없어, 단순히 세포의 형태나 크기 등 광학현미경 관찰만으로는 정확하게 동정하는 것이 어렵다. 따라서 본 연구에서는 2017년 득량만에서 발생한 Chattonella 적조 시료를 대상으로 단일 세포를 분리하고, 이들 시료의 28s rDNA, rbcL, psaA 영역을 대상으로 single-cell PCR 기법을 이용하여 종 동정을 실시하였다. 현미경 관찰 결과 장축은 평균 74.0±10.1㎛이고 단축은 평균 33.1±3.6㎛로 일반적인 Chattonella의 형태적 특징을 보였다. 28s rDNA, rbcL, psaA 영역을 대상으로 한 염기서열 비교 결과에서는 세 영역 모두에서 하나의 종으로 명확히 구분되지는 않았다. 하지만 C. marina, C. marina var. antiqua, C. marina var. ovata 그룹과 99~100% 높은 서열 유사성을 보였다.

Potato Virus Y (PVY) (Potyviridae: potyvirus) is one of the serious emerging virus of seed potato world-wide. It affects the seed potato by transmitting non-persistently via aphids. Here, we developed a simple PVY detection method which used the boiling technique for releasing of the viral RNA from aphid such as stylet and amplification by PVY specific primers located in the viral coat protein gene which suitable for various strains. This simplified method could save the time compared to earlier detection method due to the simplified RNA extraction step. Following this procedure, we tested this one step RT-PCR based PVY detection method by using three PVY vectoring aphid species (M. persicae, A. gossypii and M. euphorbiae) as well as other sucking type insect such as thrips (F. occidentalis). This PVY detection method is rapid, easy-to-use and suitable for large-scale testing in laboratories of seed potato.

PVY (Potyviridae: potyvirus) is one of the most important potato virus affecting seed potato production and also it is transmitted non-persistently via aphids. For healthy seed potato production, a virus detection system is highly important in addition to aphid monitoring and control. To achieve this detection method, it need to fast and easy to use. About two decades ago RT-PCR based PVY detection method was developed. However that was very time consuming and has low sensitivity. Here, we developed an advanced PVY detection method which a uses the boiling extraction of the viral RNA from aphid stylet and amplification by specific primers located in the viral capsid protein gene. Therefore, it could directly synthesize cDNA of PVY viral capsid gene from extracted RNA of PVY using one-step RT-PCR method in very short time compared to previous methods due to the omission of RNA extraction step. We confirmed this PVY detection method using the two aphid species (Macrosiphum euphorbiae and Aphis gossypii) that known as PVY vectors. The efficiency of this PVY detection method was 60% to 80% from two the aphid species. Hence, this method could be potentially applied to virus free seed potato production programs.