Real Time PCR을 이용한 벼 흰잎마름병균의 밀도를 측정할 수 있는 새로운 방법을 개발하였다. Real Time PCR을 이용하여 벼 흰잎마름병을 예찰하기 위하여 TaqMan MGB probe를 이용한 프라이머인 Xan_PahgeF & Xan_PahgeR primer와 Xan_Pahge FAM MGB probe를 제작하였으며, 높은 특이성이 인정되었다. 병원균 배양액, 벼 흰잎마름병원균의 DNA, 병원세균에 오염된 물에서도 효과적으로 검출이 되었다. 농수로물이나 관개수에서 벼 흰잎마름병균의 밀도를 측정할 때 정량 PCR의 저해인자 제거 후 신속하게 벼 흰잎마름병균의 밀도를 측정할 수 있다.

벼 흰잎마름병균의 정확한 진단을 위하여 PCR용 진단 kit를 개발하였다. 본 PCR kit를 개발하기 위하여 벼 흰잎마름 병균 유전체 정보 중 phage-related integrase and transposase gene의 염기서열을 이용하여 프라이머를 각각 제작하였다. 프라이머 염기서열은 XOP-F (5-CGG TCT GCT CAA TGA GGA AGA-3)와 XOP-R2 (5-TGC AAT TGG TGT TCTCCA GG-3), XOT-F (5-GTC ATA GGT GAG GCT TCCC-3)와 XOT-R2 (5-AGT GCG ATC TTT CAG CAG G-3)로 벼 흰잎마름병균의 DNA를 401bp와 492bp를 증폭하게 제작하였다. PCR 증폭은 벼 흰잎마름병균만 증폭하였으며 다른 세균인 Escherichia coli, Agrobacterim, Pectobacterium caratovora subsp. cartovorum, P. atrosepticum, Pseudomonasputida, P. syringae, P. savastanoi pv. phaeolicola, P. savastanoipv. savastanoi and P. marginalis pv. Marginalis 등은증폭되지 않아 특이성이 인정 되었다. 본 프라이머로 병이 의심되는 벼잎과 논물에서 병원균을 3시간 이내에 검출할 수 있었다.

The occurrence and damage of stink bugs were monitored at South Korea from 2007 to 2008. A total of 11 stink bug species were observed in paddy field and occurrence periods of stink bugs were significantly differed by species. In occurrence period and damage of stink bug feeding in paddy field, Scotinophara lurida occurred from June, Cletus punctiger, Eysarcoris aeneus, Rhopalus maculatus, Riptortus clavatus, E. ventralis, Stenotus rubrovittatus occurred from August and Pachygrontha antennata, C. schmidti, Trigonotylus caelestialium, Paromius exiguus occurred from September. When we were classified into two region with mountain and plain area cultivated rice, generally C. puntiger population was higher in mountain area than plain area, and E. aeneus was higher in plain area than mountain area. Also, stink bug species were higher in environment condition formed with a paddy field and a waterway overgrown with weeds. Control threshold for E. aeneus in paddy field was 1-2 individuals/heading stage, and then rate of pecky rice made to 5.0% while milk stage, dough stage and yellow ripe stage made to less than 5.0%.

The green rice leafhopper, Nephotettix cincticeps is an insect vector which transmits virus diseases of rice plant causing severe damage to the rice and its damage both quality and yield of rice. Survival rate of overwintering N. cincticeps in Alopeculus acquadis among 15 species of the winter crops and weeds was 37.8% and its most preferred. Density of N. cincticeps in environment-friendly agriculture area which cultivated Astragalus sinicus as a green manure crop in winter season increased in number wintering pass in Alopeculus acquadis and Astragalus sinicus as host plants, because of control of N. cincticeps was not enough in the previous year. Survival rate of N. cincticeps was higher mainly in habitation mixed with rice straw, Astragalus sinicus and Alopeculus acquadis as winter habitation. It warmed due to the effect of the keeping warmth inside of a rice paddy field and the bank around a rice field covered with rice straw or Astragalus sinicus. Also, habitation conditions were optimal for survival because of growing Alopeculus acquadis as the major host plant of N. cincticeps in that place.

We used an amplified fragment length polymorphism (AFLP) analysis, a novel PCR-based technique, to differentiate Xanthomonas oryzae pv. oryzae (Xoo) of Korean races. The 6 strains of Xoo K1, K2, K3 races were tested with 81 AFLP primer combinations to identify the best selective primers. The primer combinations were selected according to their reproducibility, number of polymorphic bands and polymorphism detected among Xoo strains. 18 strains of Xoo K1, K2 and K3 races were analyzed with the selected combinations of primer set. Some primer combinations (Eco R I +1 / Mse I+1) could differentiate Xoo of Korean races that were not distinguished by other fingerprinting analysis. Thus AFLP fingerprinting permitted very fine discrimination among different races.