We determined complete mitochondrial genome of Erpobdella sp. isolated in Korea. The circular mitochondrial genome of Erpobdella sp. is 15,469 bp long, which is longer than other three complete mitochondrial genomes of Erpobdella species. It includes 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNAs. Its GC ratio is 30.2%. Phylogenetic trees show that our mitochondrial genome is clustered in Erpobdellidae clade.
In this study, we have determined mitochondrial genome of Matsucoccus thunbergianae isolated in Korea. The circular mitogenome of M. thunbergianae is 15,406 bp including 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNAs. AT ratio is 78.2%. Maximum-likelihood and Bayesian inference phylogenetic trees show that M. thunbergianae is clustered with M. matsumurae, and family Margarodidae is clustered with family Pseudococcidae with enough supportive values.
Obesity is the cause of many diseases, and its severity continues to increase. Promoting non-shivering thermogenesis is attracting attention as a new treatment strategy for obesity. This study summarized the studies that evaluated the effect of Panax ginseng on promoting non-shivering thermogenesis in animal models. A total of 7 studies were included according to the selection criteria, of which five were judged to have a high risk of bias. Indicators of UCP1 mRNA, UCP1 protein, and PGC- 1a were used in the meta-analysis, and the certainty of evidence progressed for each indicator, with UCP1 protein showing the highest certainty of evidence. Meta-analysis was conducted on 5 works of literature with standard indicators. As a result of meta-analysis, UCP1 protein level and PGC-1a mRNA level were significantly increased statistically. In addition, the protein levels of PRDM16 and TFAM increased in several studies (not a meta-analysis). These findings suggest that Panax ginseng could be a potential therapeutic agent for obesity. However, further research is needed to understand its mechanisms and possible side effects fully. Thus, it is concluded that Panax ginseng in animal models can promote non-shivering thermogenesis and improve mitochondria function in animal models, opening up new avenues for research and potential clinical applications.
Athalia japonica (Klug, 1815) is a significant insect pest of turnips in Korea. The complete mitochondrial genome of this species isolated in Korea is reported in this study, which is the first attempt to study Korean Athalia species. The circular genome is 15,662 bp in length and consists of 13 protein-coding genes, two rRNA genes, 22 tRNA genes, and an A+T-rich region. Consistent with most members of the genus Athalia, five of the tRNA genes are rearranged from the typical ground pattern of ancestral insect gene order. Phylogenetic analyses inferred from the nucleotide sequences of 25 mitochondrial genomes indicate that the Korean A. japonica is a distinct member of the genus Athalia. This study accumulates mitochondrial genome data of A. japonica from various countries, providing useful information on mitochondrial genetic differences across geographical distances in the East Asian region.
Nicrophorus Fabricius, 1775, commonly known as necrophagous beetle, is associated with vertebrate carrion. Up to date, the genus consists of 72 species worldwide. In recent years, various phylogenetic studies explored on the evolution and relationship of the species in the genus. However, morphological and molecular phylogenetic studies produced conflicting results, continuing the problem over whether Nicrophrous quadraticollis is monotypic or not. The present study is to report the complete mitochondrial genome (mitogenome) of N. quadraticollis that was sequenced in prior to a systematic research of Silphinae. It was 17,747bp in length and comprised 12 protein-coding genes(PCGs), 2 rRNA Genes, 22 tRNA Genes and one non-coding region. The nucleotide composition is 40.9% for A, 36.7% for T, 9.0% for G and 13.4% for C.
The blackish cicada, Cryptotympana atrata Fabricius, 1775 (Hemiptera: Cicadidae) was originally distributed mainly in the southernmost remote island, Jeju and rarely throughout low lands in South Korea, but has been explosively increased at the urban areas, where annual temperature is higher. In this study, we sequenced a partial mitochondrial COI from a total of 171 individuals collected throughout 12 localities in South Korea. The haplotype found with the highest frequency in Jeju island shares only with two inland localities in southern region with a low frequency, whereas the haplotype found with the highest frequency throughout inland localities was not found in Jeju island. These results showed that Jeju population, southern region, and other inland populations form somewhat different genetic groups.
To assess the accuracy of species delimitation in the genus Aphaenomurus Yosii, we conducted a comparative micro-morphological study and molecular analysis using two mitochondrial (COI, 16S) and two nuclear genes (18S, 28S) on 118 specimens from 24 localities. The results showed that the morphological characters of A. vicinus and A. interpositus, as presented in the original description, were intermixed in phylogenetic lineages within the genus and did not form independent lineages. Furthermore, there were enough differences among Aphaenomurus individuals to be considered as morphologically distinct species (Th. III is 1+1 or 2+2, Abd. I is 2+2 or 3+3, Abd. II is 2+2 or 3+3), but they do not form an independent lineage. Molecular and morphological analyses have determined that A. vicinus and A. interpositus are the same species, exhibiting morphological variation in dental spines formula, claws, chaetotaxy, and other features. Additionally, the genus Aphaenomurus forms a monophyletic clade, which is further divided into several lineages within the genus. No morphological differences were observed to distinguish these lineages. This cladistic divergence is attributed to heteroplasmy, which is supported by previous studies that have suggested the possibility and problems of heteroplasmy in Collembola, and by the high genetic distances between individuals in the mitochondrial genes of Aphaenomurus.
The clearwing moth, Synanthedon bicingulata (Staudinger, 1887), is a pest that infests various species of cherry trees. However, genetic information regarding the genus Synanthedon including S. bicingulata, is limited. In this study, we sequenced a complete mitochondrial genome (mitogenome) of the species. The 16,255 bp of S. bicingulata mitogenome differs from the typical gene arrangement formed in Lepidoptera: trnQ-trnS2-trnM-trnI arrangement between the A+T-rich region and the ND2 junction. Moreover, the genome has untranslated repetitive sequences in the intergenic space between lrRNA and trnV, as well as the CGA start codon in COI and the TTG start codon in ATP8. Similar observations are noted in species belonging to the tribe Synanthedonini within the genus Synanthedon.