품종 육종의 주요 목표중 수량의 증가를 위한 요인들을 선발하는 것이 중요하며, 콩에서 수량을 결정하는 요인들중에서는 협수와 립수가 중요한 요인으로 알려져 있다. 따라서 본 연구는 큰올콩과 익산10호를 교배하여 얻은 F10세대의 RIL 계통을 이용하여 수량에 관여하는 요인중 주당협수와 주당립수 및 협당립수를 조절하는 QTL을 분석하였다. 주당협수는 염색체 5번( LG A1), 6번(LG C2), 8번(LG A2)과 9번(LG K) 및 18번(LG G)에서 5개의 독립된 QTL이 탐지되었으며, 주당립수는 염색체 1번(LGD1a+Q), 6번(LG C2), 9번(LG K), 13번 (LG F)과 17번(LG D2) 및 18번(LG G)에서 6개의 독립된 QTL이 탐지되었다. 협당립수는 2개의 독립된 QTL이 염색체 11번(LG B1)과 19번(LG L)에서 탐지되었는 데 염색체 19번(LG L)에서 탐지된 QTL은 전체 변이의 19.3%를 설명하는 주요 QTL이었다. 한편 주당협수와 주당립수는 염색체 6번(LG C2)과 9번(LG K) 및 18번(LG G)에서 공통된 QTL이 탐지되었다.
Seed dormancy is an important adaptive mechanism to protect seeds under the unfavorable environments. Unlike to wild type species, the seed dormancy trait of cultivated crops has been weakened by breeding programs during the domestication period. Weak seed dormancy often causes preharvest sprouting (PHS) problem in many cereal crops that result in significant economic loss. The seed dormancy is a quantitative trait loci (QTL) controlled by multiple genetic and environmental factors. So far, many QTLs for seed dormancy have been identified from rice and wheat as well as in the model plant Arabidopsis. Unveiling of QTL genes and complex mechanisms underlying seed dormancy is accelerated by the rapid progress of crop genomics. In the present study, we reviewed current status of research progress on the seed dormancy QTLs and correlated genes in Arabidopsis and cereal crops.
Seed weight (SW), often expressed as 100-seed weight (HSW), is an important yield component in soybean and has been found to show positive correlation with seed yield. It is shown to behave as a quantitative trait controlled by many loci that are largely unclear. In this study, we represent the identification of chromosomal regions controlling the seed weight in soybean. We used a Recombinant Inbred Line (RIL) population, consisting of 188 lines derived from a cross of a wild soybean PI483463 (HSW: 0.85g) and a cultivated soybean cultivar Hutcheson (HSW: 14.05g) to identify the chromosomal regions controlling the SW trait. The population, along with parental samples and check, William82 (HSW: 21.2g) was grown for four years and phenotype data was recorded postharvest. A total of 535 SNP and 16 SSR markers, polymorphic between the parents were employed to genotype the RILs using Golden gate assay to develop the linkage map. Whole genome QTL scanning identified a total of 17 QTLs, spanning 10 chromosomes for the 100-seed weight. All these QTLs explained phenotypic variation (PV) in the range of 3.77 to 12.33%. Of the 17 QTLs, 2 QTLs qSWA1-1 and qSWD2-1, found to be the consistent QTLs, expressing in all the four environments. The QTL qSWD2-1 explained highest contribution to the total PV with 10.04 -12.23 %. The remaining 15 QTLs were identified in at least one environment with PV ranging up to 10.39%. The findings from this study will provide useful information to understand the genetic and molecular basis of SW and facilitate further genomic research leading to the yield improvements in soybean.
Soybean seeds contain high amounts of isoflavones that display biological effects and isoflavone content of soybean seed can vary by year, environment, and genotype. Objective of this study was to identify quantitative trait loci that underlie isoflavone content in soybean seeds. The study involved 85 F2 populations derived from Korean soybean cultivar 'Kwangkyo' and wild type soybean 'IT182305' for QTL analysis associated with isoflavone content. Isoflavone content of seeds was determined by HPLC. The genetic map of 33 linkage groups with 207 markers was constructed. The linkage map spanned 2,607.5 cM across all 33 linkage groups. The average linkage distance between pair of markers among all linkage groups was 12.6 cM in Kosambi map units. Isoflavone content in F2 generations varied in a fashion that suggested a continuous, polygenic inheritance. Eleven markers (4 RAPD, 3 SSR, 4 AFLP) were significantly associated with isoflavone content. Only two markers, Satt419 and CTCGAG3 had F-tests that were significant at P<0.01 in F2 generation for isoflavone content. Interval mapping using the F2 data revealed only two putative QTLs for isoflavone content. The peak QTL region on linkage group 3, which was near OPAG03c, explained 14~% variation for isoflavone content. The peak QTL region on linkage group 5, which was located near OPN14 accounted for 35.3~% variation for isoflavone content. Using both Map-Maker-QTL (LOD~geq2.0) and single-factor analysis (P~leq0.05) , one marker, CTCGAG3 in linkage group 3 was associated with QTLs for isoflavone content. This information would then be used in identification of QTLs for isoflavone content with precision
Small seed size is one of the major traits of soybean cultivars for sprouts with regard to high sprout yield. This study was conducted to identify quantitative trait loci (QTL) for seed size and weight in a set of F 6 seeds of 89 lines derived from a cross between 'Pureunkong', a soybean cultivar developed for sprouts and 'Jinpumkong 2', a soybean cultivar with no beany taste in seed due to the lack of lipoxygenases. The genetic map of 25 linkage groups with a total of 98 markers including RFLP, RAPD, SSR and classical markers was constructed from this F/sbu 5/-derived population and was used for QTL analysis. 'Pureunkong' was significantly smaller (P<0.01) than 'Jinpumkong 2' in seed size and seed weight. Genetic variation was detected and transgressive segregation was common in the population for these traits. Seven DNA markers including opT14-1600 in LG A2, opF02-400 in LG B2, Satt100, opC09-700, opG04-730 and opQll-650 in LG C2, and opY07-1100 & 1000 in LG(unknown) were significantly associated and accounted for 4.7 to 10.9% and 5.1 to 10.1 % of the phenotypic variation in seed size and seed weight, respectively. 'Pureunkong' alleles increased seed size and seed weight at the all four significant marker loci on the LG C2. These marker loci in LG C2 were closely linked and were presumed to be a single QTL. Overall, at least three independent QTLs from 3 linkage groups (A2, B2, and C2) were putatively involved in the control of seed size and seed weight.