Gray leaf spot caused by Stemphylium spp., is a major disease of tomatoes, and it threatens its cultivation worldwide, especially in warm and humid areas. This study was conducted on 223 tomato germplasm conserved at the National Agrobiodiversity Center to select the resources resistant to the gray leaf spot pathogen strain previously isolated in Korea, using a bioassay and genotypic analysis of the resistance gene (Sm). Two weeks after inoculation with Stemphylium lycopersici, the disease index (rated on a scale of 0-4) of gray leaf spot was assessed in detached tomato leaves. The results showed that 22 resources were resistant, with a disease index of 0-1. Additionally, 65 genetic resources were found to be moderately resistant, with a disease index between 1.0 and 2.0. Subsequently, Hybridization Probe Melting (HPM) analysis of the 22 resistant genetic resources confirmed the genotype of the gray leaf spot resistance gene (Sm). Among them, 20 genetic resources showed a homozygous resistant genotype. The resources selected in this research may contribute to the breeding of new tomato varieties resistant to gray leaf spot and may serve as a basis for further genotypic analysis studies.

Lettuce (Lactuca sativa L.) is one of the most important leafy vegetables in the world due to its health related benefits. Bitter sesquiterpene lactones (BSLs) are crucial secondary metabolites of lettuce which are useful in many physiological activities, and also has been used to relieve pain. This study was conducted to appraise the variability of phenotypic characteristics and the total content of BSLs in fifty lettuce germplasm. The germplasm collections exhibited wide variation in both qualitative and quantitative characters. The average plant weight was 333.3 g with a range from 60.0 to 700.0 g and the lactucin content was varied from 3.4 (IT265031) to 448.6 (IT300287) μg/g DW with an average concentration of 94.0 μg/g DW. Whereas lactucopicrin ranged from 6.8 (IT217859) to 2,714.9 (Superseonpung) μg/g DW with an average concentration of 805.8 μg/g DW. Total BSLs content was ranged from 19.6 (IT217859) to 2,821.9 (Superseonpung) μg/g DW with the average concentration of 899.8 μg/g DW. Significant (p≤0.05) differences in lactucin, lactucopicrin and total BSLs content were found among the germplasm collections. Leafy type lettuce germplasm collections originated from South Korea revealed the highest average total BSLs content (2,821.9 μg/g DW). Principal component analyses of lactucin and lactucopicrin generated based on leaf color and plant growth type yielded two principal components, PC1 and PC2, which accounted for 60.8 and 39.2 % of the total variance, respectively. Our study provides fundamental insights on phenotypic characteristics and the total content of lactucin and lactucopicrin of lettuce germplasm which may further help researchers and breeders to produce improved lettuce varieties.

카로티노이드는 항산화 및 항암효과를 가지는 비타민 A의전구물질이다. 농촌진흥청 농업유전자원센터에서 보존하고 있는 호박자원 80자원의 과육에서 카로티노이드를 분석을 하였다. 유전자원은 한국, 멕시코, 인도의 원산지에 따라 호박 과육에서 카로티노이드를 분석하였다. 고성능 액체 크로마토그래피를 이용하여 총 9종의 카로티노이드 (크산토필류 3종과카로틴류 6종)를 분리하였다. 특히 카로티노이드 중 lutein과β-carotene 이 주로 분석이 되었다. 총 카로티노이드 함량 평균은 한국 육성종이 213.69 mg, 멕시코 재래종이 139.07mg, 인도 재래종이 69.13 mg, 그리고 한국 재래종 27.51 mg순으로 나타났다. 총 80 자원중 K188417(멕시코원산) 자원이카로티노이드 성분이 가장 많았다. 본 연구의 결과는 카로티노이드 고함유 호박 품종 개발 뿐 아니라 기능성 식품 개발의기초자료로 활용될 수 있을 것으로 사료된다.

호박 흰가루병은 호박 재배에서 중요한 병중의 하나이다. 호박 흰가루병 발생을 억제한는 최선의 방법은 흰가루병 저항성 유전자원의 선발과 이를 이용한 저항성 품종의 육성 일 것이다. 본 연구는 호박 생산에 걸림돌이 되는 흰가루병 발생을 최소화 할 수 있는 저항성 품종 육성하고자 농업유전자원센터에 보존되고 있는 유전자원으로부터 흰가루 저항성자원을 발굴하기 위하여 수행하였다. 흰가루병 저항성 평가를 위해 248점의 유전자원을 흰가루병에 감염된 잎을 가지고 접종하였으며 비닐하우스에서 접종 한달 후에 평가하였다. 호박 흰가루병 저항성으로 Cucurbita maxima 3점과 Cucurbita moschata 1점이 선발되었으며, 5점이 중도저항성으로 평가되었다. 흰가루병 저항성 정도는 표피세포와 큐티클층의 두께가 두꺼울수록 저항성으로 나타났다. 표피세포와 큐티클층의 두께가 흰가루병균의 침입을 억제하는데 중요한 역할을 할 것이다. 저항성 자원 4점은 흰가루병 저항성 육종의 재료로 이용할 수 있을 것이다.

본 연구는 농업유전자원센터에 보존되어있는 불가리아 재래종 고추 유전자원 61 점을 대상으로 농업형질을 조사하고, 22개의 분자마커(SSR marker)를 이용하여 불가리아 재래종 고추 유전자원의 유전적 다양성 및 집단분석을 통하여, 자원보존 및 효율적인 작물 육종을 위한 기초정보를 제공하고자 본실험을 수행하였으며 결과는 다음과 같다. 1. 파종 후 발아까지 소요일수는 최소 11일에서 최대 26 일,평균 16.9 일이었고 개화 소요일수는 최소 48일, 최대 65일, 평균 56.9일이었으며 성숙까지의 소요일수는 최소 73일, 최대 98일, 평균 90.7일이었다. 2. 농업형질의 특성을 바탕으로 PCA 분석을 이용하여 불가리아 고추의 다양성을 분석한 결과, 파종 후 개화까지의 소요일수에 따라 조생종, 중생종, 만생종 3개의 그룹으로 나눌 수있었다. 3. 61점의 고추자원에 대하여 22개 SSR 마커에 의해 나타난 대립유전자 (allele)수는 총 82개였다. 마커당 평균 allele수는 3.7 개였고, allele 수의 범위는 2개에서 5개로 확인되었다. 유전적 다양성을 나타내는 PIC 값의 범위는 0.061-0.636이었으며 평균 PIC 값은 0.349로 확인되었다. 4. 분자마커(SSR)를 이용하여 UPGMA, PCoA, STUCTURE 분석을 통한 고추의 다양성 및 집단 구조를 분석한 결과, 3개의 그룹으로 나뉘어졌다. 결론적으로, 농업형질 특성을 바탕으로 한 불가리아 재래종고추의 다양성과 분자학적 특성을 이용한 다양성 결과와는 차이가 있었다.

1. 키르기즈스탄은 중앙아시아의 동쪽에 동서로 길게 위치한 국가로서 국토의 약 90%가 해발 1,500 m 이상의 산악지대, 약 41%는 해발고도 3,000미터 이상의 고산지대, 평균해발은2,750 m이며, 국토면적의 약 4%가 만년설과 빙하로 덮여 있다. 2. 키르기즈스탄은 전통적인 농업국가로서 농업이 경제의 축이며 농촌인구가 65%, 농업부문 종사자가 전 산업에서 차지하는 비율이 36%이고, 농업생산이 국가전체 GDP 에서 차지하는 비중이 20% 이상으로서 비교적 높은 편이다. 3. 이 나라의 농업은 강우량이 적고 건조한 기후조건 때문에 주로 관개에 의존하고 있으며, 관개재배 면적은 약 100만 ha이고, 주요 농작물은 밀, 사료용 호박, 보리, 감자, 옥수수, 사과이다. 특히 큰 일교차와 긴 일조시수를 가진 해발 1,700m의 이시쿨 지역에서 생산되는 사과는 품질이 좋기로 유명하다. 4. 축산업이 농업전체 생산액에서 차지하는 비율이 61%를 넘어설 정도로 중요한데 주로 유목에 의존하고 있으며 유우, 육우,면양이 주된 가축이고 양봉도 중요한 위치를 차지하고 있다. 5. 키르기즈스탄은 맥류, 사과, 양파 등의 원산지일 뿐만 아니라 고산식물종의 다양성이 풍부하고, 특히 사과의 야생종이풍부하게 자생하고 있으며, 비타민 나무 등 많은 약용식물 들도 산야에 자생하고 있다. 6. 키르기즈스탄과는 2005년부터 4년 동안 유전자원 공동수집이 추진되었으나, 정부차원에서 농업기술협력 사업은 거의추진되고 있지 않다. 효율적인 협력 사업을 위해서는 상호간의 국익에 도움이 될 수 있는 과제를 발굴하여 우선순위를 정하고 이에 따라 선택과 집중을 하여야 할 것으로 판단된다.특히 키르기즈스탄은 농업유전자원 저장시설이 없고 관련분야에 대한 관심도 없으므로 금후 키르기즈스탄과는 농업유전자원에 대한 교육과 저장시설의 건설을 통하여 협력관계를 구축하면서 상호 도움이 되는 방안이 적극 모색되어야 할 것으로 사료된다.

High-quality and high-phytonutrient watermelon fruits have strong market opportunities besides their health related benefits. Hence, investigating quality and nutritional related traits of watermelon genetic resources could provide important baseline data in breeding for increased lycopene content thereby increasing the marketability of watermelon. To this end, we have examined some fruit morphological traits and lycopene content of 105 genetic resources. Seeds, originally obtained from 22+ countries, were obtained from the National Agrobiodiversity Center, Jeonju, South Korea, grown in an experimental field and harvested at a fully mature stage. The size of pistil scar (SPS), the width of stripes (WS), weight of fruit (WF), length of fruit (LF), width of fruit (WIF), the thickness of pericarp (TP), soluble solids content (SSC), fruit shape in longitudinal section, ground color of skin, the intensity of the green color of skin, fruit shape at the apical part, grooving distribution, conspicuousness of stripes, and main color of the flesh were recorded on the field and inside laboratory and the lycopene was measured using spectrophotometric and HPLC methods. Watermelon fruits have shown a diverse morphological characters. Red and pink fleshed fruits dominated in the entire collections. Fruits with higher thickness of rind were found to exhibit less soluble solid content (SSC). Korean origin fruits were characterized by intermediate SSC while the United States of America (USA), Russia (RUS), Tajikistan (TJK), Turkmenistan (TKM), Taiwan (TWN), and Uruguay (URY) originated fruits had the highest SSC. The lycopene content varied between 41.37 and 182.82 ㎍/g, 2.81 and 163.72 ㎍/g, and 3.54 and 255.47 ㎍/g using HPLC, UV-Vis spectrophotometer, and microplate reader spectrophotometer, respectively. Red- and pink-fleshed fruits had the highest levels of lycopene content compared to the yellow- and orange-fleshed. Lycopene content had a significant positive correlation with SSC, however, no correlations were detected between lycopene and other quantitative fruit morphological characters. Our study demonstrated high diversity exists in fruit morphological traits and lycopene content of the germplasm collections which provide beneficial baseline data for a future breeding program and utilization of watermelon germplasm collections in gene banks for the maintenance and improvement of the current levels of production, marketability, and health-related benefit of watermelon fruits.

The objectives of this study were to evaluate total phenolic content (TPC) and individual phenolic compounds in leaves of perilla genetic resources, assess whether they could be used as distinguishing factor among germplasms, and evaluate their relationship with some quantitative and qualitative morphological characters. TPC and individual phenolic compounds were determined using Folin-Ciocalteu method and UPLC-PDA system, respectively. Wide variations in TPC (7.99 to 133.70 ㎎GAE/g DE), rosmarinic acid (ND to 21.05 ㎎/g DE), caffeic acid (ND to 1.17 ㎎/g DE), apigenin- 7-O-diglucuronide (ND to 2.21 ㎎ luteolin equivalent (㎎LUE)/g DE), scutellarein-7-O-glucuronide (ND to 5.25 ㎎ LUE/g DE), and apigenin-7-O-glucuronide (ND to 2.81 ㎎ LUE/g DE) were observed. Intensities of green pigment at abaxial and adaxial leaf surfaces were positively correlated with phenolic compounds whereas leaf length and width had negative correlation. Purple pigmented accessions were shorter in leaf length and width but exhibited higher amount of phenolic compounds compared to green pigmented accessions in most cases. Leaf shape was not related with content of phenolic compounds, color of leaves, and length/width of leaves. TPC and individual phenolic compounds along with morphological characters could be useful distinguishing factors for perilla genetic resources.

Sclerotinia rot, caused by Sclerotinia sclerotiorum, is a devastating disease that poses a serious threat to perilla production in Korea. Identifying effective sources of resistance offers long term prospects for improving management of this disease. Screening disease resistant genetic resources is important for development of disease-resistant, new cultivars and conduct related research. In the present study, perilla germplasm were screened in vitro against S. sclerotiorum using detached leaf method. Among 544 perilla accessions, two were highly resistant (IT226504, IT226533), five were resistant (IT226561, IT226532, IT226526, IT226441, and IT226589), five were moderately resistant (IT226525, IT226640, IT226568, IT220624, and IT178655), 16 were moderately susceptible, 31 were susceptible, and 485 were highly susceptible. The resistant accessions in this study could serve as resistance donor in the breeding of Sclerotinia rot resistance or subjected to selection procedure of varietal development for direct use by breeders, farmers, researchers, and end consumers.

Inflorescence, stem, and leaf samples of lettuce grown in a greenhouse in spring and autumn seasons were assayed for sesquiterpene lactones (SLs) content by high performance liquid chromatography. The concentrations of SLs were significantly higher in the inflorescences followed by upper leaf and stem compared to the other plant parts in most of the samples. SLs content (sum of lactucin and lactucopicrin) in various tissues of lettuce cultivated in spring season varied from 5.7 to 22.5 fold ranging from 27.4 ㎍/g dry weight (DW) in the upper stem (cultivar “PI 176588”) as the lowest to as high as 2,292.0 ㎍/g DW in the inflorescence (cultivar “709849-1”). During autumn cultivation, the concentration of SLs varied from 2.0 to 14.4 fold ranging from as low of 32.4 ㎍/g DW in the lower stem (cultivar “PI176588”) to as high of 838.0 ㎍/g DW in the upper leaf (cultivar “Dambaesangchu”). Higher lactucin (1.2 to 5.6 fold) and lactucopicrin (1.1 to 3.9 fold) concentration was observed during spring compared to autumn cultivation in most of the samples. SLs content in various organs of lettuce increases from the basal plant part going upwards. As lactucin and lactucopicrin are the major SLs which affects the sensory property of lettuce, their quantitative variation in the lettuce cultivars is useful for breeding new varieties with better consumer acceptance.

Identification of Fusarium oxysporum f. sp. raphani and investigation on fusarium wilt development by isolates and inoculation methods were conducted to establish a screening method for fusarium wilt-resistance in radish (Raphanus sativus L.) germplasm. Pathogenicity of F. oxysporum f. sp. raphani isolate, Heonggye-1 and Heonggye-2, to radish plants was confirmed by seedling test. Radish seedlings were inoculated by root-dipping and soil-drenching with or without root-wounding. For Heonggye-1 isolate, mean disease indexes were 4.13 and 3.91 by root-dipping and soil-drenching with root-wounding, respectively, but those were 1.87 and 1.88 without root-wounding. For Heonggye-2 isolate, mean disease indexes were 3.83 to 4.37 regardless of inoculation methods. Two-hundred sixty accessions of radish germplasm collected from 9 countries of Asia and Europe were evaluated for fusarium wilt-resistance by soil-drenching with root-wounding with Heonggye-2 isolate. Fifty-four resistant accessions with higher than 70% of the percentage of resistant seedlings in accession (PR) and lower than 20% of the percentage of susceptible seedlings in accession (PS) was found. Eighteen susceptible accessions with lower than 20% of PR and higher than 50% of PS were selected. These accessions could be used as breeding and research materials after re-evaluation of disease-resistance and characterization of agronomical traits.

This experiment was carried out to compare the morphological traits of Korean, Chinese, Japanese and Southeast Asian(SEA) soybeans from RDA genebank. Days to flowering were ranged from 51 to 125 days with an average of 75 days. Those of China were the shortest with an average of 58 days and those of SEA were the longest with an average of 99 days. Growth days were the shortest with 94 days from China, and longest with 188 days from Korea and SEA. The 100 seed weight of soybeans was ranged from 3.4g to 46.4g, with an average 22.2g. The 100 seed weight was the lightest with an average 11.8g from SEA and the heaviest with an average 24.6g from Korea. In growth habit, over 50% of being collected from Korea, Japan and China were erect type, but 94% from SEA were intermediate type. The highest percentage of seed coat color was yellow(66.1%), followed by yellowing green(10.0%). As a result of cotyledon color in 760 black seed was 76.1% with yellow, 23.9% with green. Green cotyledon was much more in Korea(38.6%) and Japan(33.3%) than other countries. One thousand seven accessions from Korea, Japan, China and SEA were analyzed using 7 SSR markers. One hundred eighty alleles were detected with a lowest 16 at the Satt537 and a highest 35 at the Satt390. The average polymorphism information content(PIC) was 0.68, the highest with 0.7 in Japan. Gene diversity was the highest with 0.73 in China and Japan, while the lowest in SEA with 0.68.

The chloroplast (cp) is an organelle with its own genome encoding a number of cp-specific components. The membrane-bound organelles are mainly involved in the photosynthetic conversion of atmospheric CO2 into carbohydrates in which light energy is stored as chemical energy. Resequencing technology via next-generation sequencing has recently been successfully applied which results the field of cp genome characterization is growing fast. Here, we report the complete sequence of the chloroplast genome of Capsicum frutescens, a species of chili pepper. The total length of the genome is 156,817 bp, and the overall GC content is 37.7%. A pair of 51,584-bp inverted repeats (IRs) is separated by a small (17,853 bp) and a large (87,380 bp) single-copy region. The C. frutescens chloroplast genome encodes 103 unique genes, including 79 protein-coding genes, 20 tRNA genes, and four rRNA genes. Of these, 19 genes are duplicated in the IRs and 18 genes contain one or two introns. Comparative analysis with reference cp genome revealed 125 simple sequence repeat (SSR) motif and 34 variants, mostly located in the non-coding regions. These microsatellite markers will facilitate the studies of genetic diversity, population genetic structure, and sustainable conservation for C. frutescens.

Glutenin is the major factor responsible for the unique viscoelastic dough characterisitcs of wheat flour, which determine mixing and bread baking performance(X.Shan et al, 2007). And early maturity is one of the most important cultural characteristic in Korea because of its winter cropping system. This study is to reveal the genetic properties of Asian wheat landrace collection originated from 6 separate regions such as Korea, China, Japan, Afganistan, Iran, Pakistan, Caucasus, and Middle East. Using germplasms maintained in National Agrobiodiversity Center, RDA, Korea, the variations in morphological character and HMW glutenin subunit composition were investigated. In this study, Glu-A1c(null), Glu-B1b(7+8) and Glu-D1a(2+12) alleles are the most frequent in Asian landrace wheats. When it comes to unique composition, Glu-B1aj(8) and Glu-D1q(2+11) subunits are only in Afghanistan wheat. And Glu-B1k(22), Glu-D1l(12), Glu-D1m(10) subunits are only in accessions from Pakistan, Korea, and China, respectively. The accessions from Iran and Caucasus have the highest PIC value(0.57), which shows wheat origin region has high genetic diversity. Grouping by UPGMA anlysis of combination of Glu-1 allele, most accessions from Afghanistan, Korea, and Japan were in the same group despite of geological distance. Contrasively, many germplasms originated from China, Caucasus, and Middle East were in the other same group. The evaluation of bread baking quality by Glu-1 scoring system, 34 accessions are perfect 10. 16 samples from China and 1 Afghanistan among them were also matured before early June, suitable to Korean cropping system. Especially, 3 accessions(K151847, K151865, K151962) had extremely early maturity, ripened before late May. These genetic resources having good gluten quality and early maturity are expected to be used for Korea wheat breeding system.

This study aimed to evaluate 105 tomato accessions conserved in National Agrobiodiversity Center regarding their resistance to Ralstonia solanacearum, a soil-borne vascular bacterium that causes lethal wilt diseases of a wide range of crops worldwide. All the accessions are Solanum lycopericum var. lycopersicum including cultivar or breeding lines. At the four leaf stage, the seedlings were inoculated by drenching the soil with the bacterial suspension concentrated of 108 CFU/ml. Plant roots were wounded before inoculation by cutting with the knife. Seven accessions including IT 32899 were rated as resistant, while other 98 accessions were rated as susceptible. IT 32899 scored 0.1 of disease rate and 0.7 of disease index. The selected accessions will be used as a material to reveal the mechanism of wilt tolerance and to identify the host gene involved in defense response.

Capsicum diversity is getting lower in modern crops because of the genetic erosion. In Capsicum, breeders have been mainly focused on agriculturally important traits such as disease resistances, high yield and pungency. This narrow breeding pool hampered to develop improved cultivars. It has become a hot issue to conservation of genetic diversity and exploitation of wild germplasm in Capsicum. However, although a large number of accessions are maintained in Capsicum germplasm collections, their use for crop improvement is limited by the scarcity of information on genetic diversity, population structure and proper phenotypic assessment. The identification of representative and manageable subset of accessions would facilitate access to the diversity available in large collections. A genome wide germplasm characterization using molecular markers can offer reliable tools for adjusting the quality and representativeness of core samples. We investigated patterns of molecular diversity at 48 single nucleotide polymorphisms (SNPs) in 4056 accessions from 11 Capsicum species from 89 different countries. Using these genetic variations and 32 different morphological traits, 250 core set was selected in whole Capsicum germplasm. The core collection could be a primary source for distributing germplasm to pepper breeders and other national programs as well as for evaluation