In ecosystems within limited resources, interspecific competition is inevitable, often leading to the competitive exclusion of inferior species. This study aims to provide foundational information for the conservation and restoration management of Microphysogobio rapidus by evaluating species’ ecological response to biological factors within its habitat. To understand this relationship, we collected food web organisms from site where M. rapidus coexist with Microphysogobio yaluensis, a specie ecologically similar to M. rapidus, and evaluated the trophic levels (TL), isotopic niche space (INS), and the overlap of INS among fishes within the habitat using stable isotope analysis. Our analysis revealed that the M. rapidus exhibited a higher TL than M. yaluensis, with TL of 2.6 and 2.4, respectively. M. yaluensis exhibited a broad INS, significantly influencing the feeding characteristics of most fish. Conversely, M. rapidus showed a narrow INS and asymmetric feeding relationships with other species, in habitats with high competition levels. This feeding characteristics of M. rapidus indicate that the increase in competitors sharing the similar resources lead to a decrease in available resources and, consequently, is expected to result in a decrease in their density.

Small ponds, which exhibit unstable succession pattern of plankton community, are less well studied than large lakes. Recently, the importance of small ponds for local biodiversity conservation has highlighted the necessity of understanding the dynamics of biological community. In the present study, we collected zooplankton from three small reservoirs with monthly basis and analyzed their seasonal dynamics. To understand the complicated zooplankton community dynamics of small reservoirs, we categorized zooplankton species into four groups (LALF Group, Low Abundance Low Frequency; LAHF Group, Low Abundance High Frequency; HALF Group, High Abundance Low Frequency; HAHF Group, High Abundance High Frequency) based on their occurrence pattern (abundance and frequency). We compared the seasonal pattern of each group, and estimated community diversity based on temporal beta diversity contribution of each group. The result revealed that there is a relationship between groups with the same abundance but different occurrence frequencies, and copepod nauplii are common important component for both abundance and frequency. On the other hand, species included with LALF Group throughout the study period are key in terms of monthly succession and diversity. LALF Group includes Anuraeopsis fissa, Hexarthra mira and Lecane luna. However, groups containing species that only occur at certain times of the year and dominate the waterbody, HALF Group, hindered to temporal diversity. The results of this study suggest that the species-specific occurrence pattern is one key trait of species determining its contribution to total annual biodiversity of given community.

The medium-large cladoceran species Simocephalus spp. predominantly occur in habitats with developed aquatic vegetation. Accordingly, due to Simocephalus’ high contribution to zooplankton community biomass in the lake’s littoral zone and wetland habitats, estimating their biomass is important to understand the matter cycling based on biological interactions within the aquatic food web. In this study, we reviewed the length-weight regression equations used previously to estimate Simocephalus biomass, directly measured S. serrulatus’ body specification (length, width and area) and their biomass (dry weight) using instruments such as a microscopic digital camera and a microscale, and performed regression analysis between each other. When S. serrulatus biomass was estimated using the equation (Kawabata and Urabe, 1998) presented in 『Biomonitoring Survey and Assessment Manual』, Korea, errors between estimates and measures were relatively large compared to the S. serrulatus species-specific biomass estimate equation developed by Lemke and Benke (2003). In addition, both equations showed not only increasing trends in error (estimate-measure) with increasing S. serrulatus’ body length, but also in error variance among similar-sized individuals. The results of regression analysis with dry weight by body specifications indicated that the most appropriate equation for estimating the biomass of S. serrulatus was derived from the width-dry weight exponential regression equation (R2=0.9555). The review and development study of such species-specific biomass estimation equations for zooplankton can be used as a tool to understand their role and function in aquatic ecosystem food webs.

Recently, Korean government has introduced Multi Metric Indices (MMI) using various biocommunity information for aquatic ecosystem monitoring and ecosystem health assessment at the national level. MMI is a key tool in national ecosystem health assessment programs. The MMI consists of indices that respond to different target environmental factors, including environmental disturbance (e.g. nutrients, hydrological and hydraulic situation of site etc.). We used zooplankton community information collected from Korean lakes to estimate the availability of candidate zooplankton MMI indices that can be used to assess lake ecosystem health. First, we modified the candidate indices proposed by the U.S. EPA to suit Korean conditions. The modified indices were subjected to individual index suitability analysis, correlation analysis with environmental variables, and redundancy analysis among indices, and 19 indices were finally selected. Taxonomic diversity was suggested to be an important indicator for all three taxonomic groups (cladoceran, copepod, rotifer), on the other hand, the indices using biomass for large cladocerans and copepods, while the indices using abundance were suggested for small cladocerans and rotifers.

Through sample-size-based rarefaction analyses, we tried to suggest the appropriate degree of sample concentration and sub-sample extraction, as a way to estimate more accurate zooplankton species diversity when assessing biodiversity. When we collected zooplankton from three reservoirs with different environmental characteristics, the estimated species richness (S) and Shannon’s Hʹ values showed different changing patterns according to the amount of sub-sample extracted from the whole sample by reservoir. However, consequently, their zooplankton diversity indices were estimated the highest values when analyzed by extracting the largest amount of sub-sample. As a result of rarefaction analysis about sample coverage, in the case of deep eutrophic reservoir (Juam) with high zooplankton species and individual numbers, it was analyzed that 99.8% of the whole samples were represented by only 1 mL of sub-sample based on 100 mL of concentrated samples. On the other hand, in Soyang reservoir, which showed very small species and individual numbers, a relatively low representation at 97% when 10 mL of sub-sample was extracted from the same amount of concentrated sample. As such, the representation of sub-sample for the whole zooplankton sample varies depending on the individual density in the sample collected from the field. If the degree of concentration of samples and the amount of subsample extraction are adjusted according to the collected individual density, it is believed that errors that occur when comparing the number of species and diversity indices among different water bodies can be minimized.

Estuary is important in terms of biodiversity because it has the characteristics of transition waters, created by the mixing of fresh- and seawater. The estuarine water circulation provides a variety of habitats with different environments by inducing gradients in the chemical and physical environment, such as water quality and river bed structure, which are ultimately the main factors influencing biological community composition. If the water circulation is interrupted, the loss of brackish areas and the interception of migration of biological communities will lead to changes in the spatial distribution of biodiversity. In this study, among the sites covered by the Estuary Aquatic Ecosystem Health Assessment, we selected study sites where changes in biodiversity can be assessed by spatial gradient from the upper reaches of the river to the lower estuarine area. The α-, γ- and β-diversity of diatom, benthic macroinvertebrates, and fish communities were calculated, and they were divided into open and closed estuary data and compared to determine the trends in biodiversity variation due to estuarine circulation. As results, all communities showed higher γ-diversity at open estuary sites. The benthic macroinvertebrate community showed a clear difference between open and closed estuaries in β-diversity, consequently the estuarine transects were considered as a factor that decreases spatial heterogeneity of their diversity among sites. The biodiversity trends analyzed in this study will be used to identify estuaries with low γ- and β-diversity by community, providing a useful resource for further mornitoring and management to maintain estuarine health.

The time series data of rotifer community focusing on the species number and total density were collected from 29 reservoirs located at Jeonnam Province from 2008 to 2016 quarterly. The reservoirs had similar weather condition during the study period, but their sizes and water qualities were different. To analyze the temporal dynamics of rotifer community, the medians, ranges, outliers and coefficient of variation (CV) value of rotifer species number and abundance were compared. For the temporal trend analysis, time series of each reservoir data were compared and clustered using the dynamic time warping function of the R package “dtwclust”. Small-sized reservoirs showed higher variability in rotifer abundance with more frequent outliers than large-sized reservoirs. On the other hand, apparent pattern was not observed for the rotifer species number. For the temporal pattern of rotifer density, COD, phytoplankton abundance fluctuation, and cladoceran abundance fluctuation have been suggested as potential factor affecting the rotifer abundance dynamics.

A sediment control dam is an artificial structure built to prolong sedimentation in the main dam by reducing the inflow of suspended solids. These dams can affect changes in dissolved organic matter (DOM) in the water body by changing the river flow regime. The main DOM component for Yeongju Dam sediment control of the Naeseongcheon River was analyzed through 3D excitation-emission matrix (EEM) and parallel factor (PARAFAC) analyses. As a result, four humic-like components (C1~C3, C5), and three proteins, tryptophan-like components (C2, C6~C7) were detected. Among DOM components, humic-like components (autochthonous: C1, allochthonous: C2~C3) were found to be dominant during the sampling period. The total amount of DOM components and the composition ratio of each component did not show a difference for each depth according to the amount of available light (100%, 12%, and 1%). Throughout the study period, the allochthonous organic matter was continuously decomposing and converting into autochthonous organic matter; the DOM indices (fluorescence index, humification index, and freshness index) indicated the dominance of autochthonous organic matter in the river. Considering the relative abundance of cyanobacteria and that the number of bacteria cells and rotifers increased as autochthonous organic matter increased, it was suggested that the algal bloom and consequent activation of the microbial food web was affected by the composition of DOM in the water body. Research on DOM characteristics is important not only for water quality management but also for understanding the cycling of matter through microbial food web activity.

To understand how to efficiently observe the biomass and community of phytoplankton, phytoplankton sampling was carried out from June to October 2019 at the Yeongju dam sediment control reservoir (YJ) and Bohyeonsan dam reservoir (BH1 and BH2). The results derived from microscopic observation, such as the conventional phytoplankton qualitative/quantitative analysis, and from the CHEMTAX method based on the pigments, were compared. The relative contribution of phytoplankton, calculated by the microscopy and CHEMTAX methods, showed a significant difference in all four classes: cryptophyta, chlorophyta, cyanobacteria, and diatoms. In addition, the correlation between the two observation methods was poor. This might be caused by methodological differences in microscopy that do not consider the varying cell sizes among phytoplankton species. In this study, by converting the cells into carbon, the slope between both carbon biomasses based on microscopy and CHEMTAX was improved close to the 1 : 1 line, and the y-intercept was closer to 0 for cryptophyta and diatoms. For cyanobacteria, the slope increased, the y-intercept decreased, and the plot approached 1 : 1 although the correlation coefficients were not improved in all classes. The present study suggests that application of CHEMTAX based on pigment analysis could be a possible approach to efficiently determine the relative carbon proportions of individual classes of phytoplankton community composition.

동물플랑크톤이 식물플랑크톤을 선택적으로 섭식하는 특성에 대한 이해는 수생태계 먹이사슬 내의 물질 이동에 중요하다. 하지만 해부를 통한 위내용물 추출 방법은 소형 요각류를 대상으로 적용하기에는 적절하지 않고, 유전자가 유실되거나 위내용물이 아닌 개체 외부의 유전자로 인해 오염될 가능성이 존재한다. 본 연구에서 호내 식물 플랑크톤 조성 및 기타 환경이 상이한 두 지점을 선정하여 모든 지점에서 지속적으로 출현하는 기수성 요각류인 Sinocalanus tenellus를 대상으로 위내용물의 유전자 분석을 수행하였다. 요각류 개체 외부의 DNA를 제거하는 데 2.5%로 희석한 시판용 표백제(차아염소산나트륨 5.4%) 에 2분간 처리하여 증류수로 2회 세척한 뒤 유전자를 추출하였다. 추출된 유전자는 23S rRNA을 증폭하여 서열분석을 실시하였다. Capillary sequencing 분석 결과, 원수와 처리수 및 요각류 위내용물에서 다양한 분류군 (규조강, 녹조 강, 남조강, 와편모조강, 은편모조강, 황갈조강)에 속하는 식물플랑크톤이 검출되었으며, 새만금호 내 시공간 차이에 따라 상이한 경향을 보였다. 현미경을 이용하여 동정한 식물플랑크톤 군집 조성의 경우 규조강이 우점한 반면, 동일한 원수의 유전자 분석 (capillary sequencing) 결과에서는 주로 녹조강, 남조강 및 와편모조강이 우점하여 다소 상반된 경향을 나타냈다. 본 연구에서 적용한 위내용물 분석에 특화된 외부 유전자 제거 전처리 방법은 농도와 처리시간 조절 등의 응용방법에 따라 다양한 동물플랑크톤 분류군에 적용이 가능할 것으로 사료된다.

동물플랑크톤 군집 연구에 DNA 바코딩과 같은 DNA 분 석 기법의 적용은 분류형태학을 기반으로 하는 전통적인 종 동정 시 발생할 수 있는 문제 (e.g. 개체의 표현형 가소성에 의한 오동정, 유사종 및 자매종, 유생 시기의 종 동정의 어려움)를 보완할 수 있다. 최근 DNA 시퀀싱 기술의 발전으로 다양한 수생태계의 동물플랑크톤 군집은 물론, 육안 및 현미경을 통해 구분하는 데 한계가 있는 동물플랑크톤의 위 내용물에 대한 DNA 기반 군집 분석 또한 가능하게 되었으며, 이는 동물플랑크톤의 섭식 먹이원 분석을 통한 생물학적 상호 작용을 이해를 돕는다. 본 논문은 동물플랑크톤 연구에 DNA 분석 기법이 활용된 사례 (e.g. DNA 바코딩을 이용한 계통분 류학적 연구, 메타바코딩을 이용한 군집 분석, 위 내용물 분석)를 소개하고 분석 방법을 요약하여, 최종적으로 향후 이를 활용하고자 하는 연구자들에게 연구 접근성을 높일 수 있도록 방법론적인 기초 지식을 제공하고자 하였다.

호소 생태계에 대한 생물측정망 조사 및 평가지침은 동물플랑크톤 조사의 편의성을 고려하여 출현 종 수와 개체 군밀도, 군집 지수 등을 상대적으로 비교하기 위해 수심 5 m 이하의 얕은 호소-수변부에서 사선끌기, 수심 20 m 이상 호소-전수심 수직끌기, 그 이상의 깊은 호소-20 m까지의 수심을 대상으로 한 수직끌기를 제시하고 있다. 본 연구에 서는 지침에서 제시하는 방법 중 사선끌기법과 20 m 수직 끌기법을 각각 전수심을 대상으로 한 조사 방법과 비교하여 동물플랑크톤 군집 정보의 차이 및 특성에 대해 분석 하였다. 군집 지수의 경우 수심이 얕은 호수에서의 사선끌 기법/수직끌기법 비교에서는 차이를 보이지 않은 반면, 수 심이 깊은 호소에서는 끌기 수심을 20 m로 제한할 경우보다 전수심 수직끌기를 적용했을 때 다양도 및 풍부도 지수 가 상승하는 것으로 나타났다. 또한, 사선끌기 및 20 m 수직끌기를 통해 채집한 동물플랑크톤 시료로부터 표면~저층 상층부까지의 전수심을 채집 대상으로 설정한 경우보 다 약 3배 정도 높은 개체군 밀도가 계산되어, 동물플랑크톤 총 개체 밀도가 크게 과대 평가되는 것으로 나타났다. 이러한 차이는 동물플랑크톤 수직 분포 특성상 발생하는 수층별 동물플랑크톤 개체 밀도 차이 및 여과된 원수량의 차이에서 비롯된 결과로 판단되며, 이에 따라 호소를 대변 하여 수체 간 또는 수체 내 변동을 보다 정확히 파악하고 호 내 2차 생산과 관련한 기능적 정량 지표로서 동물플랑크톤 군집 정보의 활용을 고려할 경우, 수심에 따른 개체 군밀도 분포와 전체 개체수 환산 시 수층별 기여율을 고려한 전수심 수직끌기 방법의 적용이 보다 적절할 것으로 분석되었다.

동물플랑크톤은 식물플랑크톤 및 기타 소형 미생물을 섭식하고, 고차 생물군집에 포식되어 일차생산과 상위 영양단계를 연결하는 중추적인 연결고리 역할자로 수생태계 내 물질 및 에너지 순환 구조와 기능을 이해하는데 필수적인 요소로 여겨지고 있다. 하지만, 동물플랑크톤은 분류군에 따라 상이한 크기와 유영능력, 그에 따른 다양한 서식 특성을 가지고 있어, 식물플랑크톤에 비해 다소 복잡한 채집 및 분석방법이 요구된다. 정확한 동물플랑크톤 정량화를 위해서는 종특이적인 분포를 고려하여 장소를 선정하 고 적합한 도구 (채수기, 플랑크톤 네트 등)를 이용하여 시료를 채집해야 할 필요가 있으며, 동정 및 계수 중에 발생 할 수 있는 오차를 최소화하기 위해서는 고정법과 부차시료에 대한 고려도 중요하다. 본 논문에서는 현재 사용되고 있는 대표적인 동물플랑크톤 정량채집방법 및 시료처리방법의 장·단점을 소개하여 연구 목적에 부합하는 방법을 선택, 적용할 수 있도록 가이드라인을 제시하고자 하였다.

Recently, quantitative analyses of food web structure based on carbon and nitrogen stable isotopes are widely applied to environmental assessments as well as ecological researches of various ecosystems, particularly rivers and streams. In the present study, we analyzed carbon and nitrogen stable isotope ratios of POM (both planktonic and attached forms), zooplankton, benthic macroinvertebrates and fish collected from 6 sites located at Nakdong River. Samples were collected from upstream areas of 5 weirs (Sangju, Gangjeong- Goryeong, Dalseong, Hapcheon-Changnyeong, and Changnyeong-Haman Weirs) and one downstream area of Hapcheon-Changnyeong Weir in dry season (June) and after rainy season (September). We suggested ranges of their carbon and nitrogen stable isotope ratios and calculated their trophic levels in the food web to compare their temporal and spatial variations. Trophic levels of organisms were relatively higher in Sangju Weir located at upper part of Nakdong River, and decreased thereafter. However, the trophic levels were recovered at the Changnyeong-Haman Weir, the lowest weir in the river. The trophic level calculated by nitrogen stable isotope ratios showed more reliable ranges when they were calculated based on zooplankton than POM used as baseline. The suggested quantitative ecological information of the majority of biological communities in Nakdong River would be helpful to understand the response of river food web to environmental disturbances and can be applied to various further researches regarding the quantitative approaches for the understanding food web structure and function of river ecosystems as well as restoration.

In this study, we estimated the applicability of length-weight relationship-based biomass calculations by comparison of body length of genus Polyarthra collected from different habitats. Through the comparison, we also tested availability of representative species-specific biomass value of Polyarthra which is often used without length measurement. Polyarthra samples were collected from rivers (Han River and Nakdong River) and reservoir (Paldang Reservoir), and the body length was measured for statistical comparison among habitats and biomass calculations using different equations suggested previously. According to the results, the body length of Polyarthra spp. was significantly different among sampling sites, and the necessity of body length measurement for rotifer species in each situation has been suggested rather than using the representative biomass values which is fixed without considering time and space. Comparison of suggested biomass calculations based on our measured Polyarthra body length, the equation suggested by McCauley showed more reasonable range of biomass values than that suggested by EPA. In addition, in order to calculate more accurate biomass, it is necessary to measure the body length of rotifers, at least more than 44 individuals to reduce error probability to less than 5% with 99% probability. However, since direct measurement of rotifers biomass is limited, it is considered that further analyses are required for more precise application of rotifer biomass of which has high variability due to complex morphologies and species-specific cyclomorphosis often induced by biotic and abiotic factors in the habitats.

This review summarizes the history of freshwater zooplankton research in Korean Society of Limnology and necessary future topics that are remain poorly investigated in South Korea based on main research topics of published articles focusing on lakes, reservoirs, rivers and wetland ecosystems. In Korea, a total 450 freshwater zooplankton species have been reported (85 species of cladocera, ca. 230 species of rotifera since 1939, and 138 species of copepoda), and they cover 10% of total zooplankton species list. In the present paper, we provide recent species list of zooplankton found in Korea and their taxonomic keys. Over periods of 45 years, there are 25 published papers for zooplankton biota in lentic ecosystems in Korean Journal of Ecology and Environment (KJEE). The ecology of zooplankton communities in rivers has focused on the mechanisms involved in regulating their abundance, diversity and spatio-temporal patterns of genus Bosmina and rotifers (genus Brachionus and Keratella) that are most frequently found from Korea. On the other hand, the studies on zooplankton in wetland has focused on Alona, Chydorus and Ceriodaphnia with special emphasis on their relationships with aquatic macrophytes. Even though studies on the freshwater ecosystem in Korea have a long history, a few of studies on zooplankton biota were conducted at rice paddy, Dumbeong and wetlands. During the last two decades, experimental advances in freshwater zooplankton ecology and understanding of structure and function of this biota were made from a series of articles mainly in journal of KJEE. For future studies, quantitative, experimental and interdisciplinary approaches would be key words to understand zooplankton ecology and their roles in aquatic ecosystems under changing environments, and we have suggested necessary zooplankton research fields and future directions.