Plasmids from Bacillus thuringiensis have been implicated in pathogenicity as they carry the genes responsible for different types of diseases that in mammals and insects. A novel serogroup (H3a3b3d), B. thuringiensis strain K4 which showed mosquitocidal activity against Anopheles sinensis and Culex pipiens pallens, was isolated from fallen leaves in Mungyeong city, Republic of Korea. In contrast to the complicated plasmid profiles of B. thuringiensis H3 serotype strains, the strain K4 (designated as serovar mogi) had only one large plasmid (>200kb) on which the toxin genes were occasionally located. A 454 pyrosequencing was used for the complete sequencing of the large plasmid. The sequence analysis showed that k4 plasmid had at least seven putative cry genes, ending up to showing 84%, 75%, 73%, 58%, 84%, 39% and 75% homology with Cry27Aa, Cry19Ba, Cry20-like, Cry56Aa, Cry39ORF2, Cry8Ba and Cry40ORF2 toxins in amino acids, respectively. This novel 3a3b3d type strain, B. thuringiensis serovar mogi, can be used as a good resource for studying unknown mosquitocidal cry genes. The E. coli-B. thuringiensis shuttle vector, pHT1K was used to clone these cry genes for characterization. In each clone, the level of transcription and production of crystal proteins will be investigated in near the future.

The gene (2,304-bp) encoding a novel xylanolytic enzyme (XylD) with a catalytic domain, which is 70% identical to that of Cellulomonas flavigena DSM 20109 GH6 β-1,4-cellobiohydrolase, was identified from an earthworm (Eisenia fetida)-symbiotic bacterium, Cellulosimicrobium sp. strain HY-13. The enzyme consisted of an N-terminal catalytic GH6-like domain, a fibronectin type 3 (Fn3) domain, and a C-terminal carbohydrate-binding module 2 (CBM 2). XylDΔFn3-CBM 2 displayed high transferase activity (788.3 IU mg-1) toward p-nitrophenyl (PNP) cellobioside, but did not degrade xylobiose, glucose-based materials, or other PNP-sugar derivatives. Birchwood xylan was degraded by XylDΔFn3-CBM 2 to xylobiose (59.2%) and xylotriose (40.8%). The transglycosylation activity of the enzyme, which enabled the formation of xylobiose (33.6%) and xylotriose (66.4%) from the hydrolysis of xylotriose, indicates that it is not an inverting enzyme but a retaining enzyme. The endo-β-1,4-xylanase activity of XylDΔFn3-CBM 2 increased significantly by approximately 2.0-fold in the presence of 50 mM xylobiose.

제주도 숨은물벵뒤 습지에서 Betaproteobacteria의 종다양성을 조사하였고, 신분류군 후보 22균주를 확보하였다. 분리주의 16S rRNA 유전자 염기서열을 분석한 결과Burkholderiaceae (3균주), Comamonadaceae (8균주), Oxalobacteraceae (5균주) 및 Neisseriaceae (5균주) 등 4개 과에 속한 15속, 그리고 소속 미상의 Burkholderiales 소속1속(1균주)으로 동정되었다. Chr

제주도 한라산에 위치한 국내 최대규모의 고산습지인 숨은물벵뒤 습지의 Alphaproteobacteria와 Gammaproteobacteria강에 속하는 세균 종의 다양성을 조사하였고, 신분류군 후보 균주 19종을 확보하였다. 신종후보 균주의 16S rRNA 유전자 염기서열을 분석하였을 때 표준균주와 98.7% 미만의 유사도를 보이는 균주들을 신종후보균주로 간주하였다. 총 19종의 세균이 Alphaproteobacteria와 Gammaproteobacte

제주도 한라산의 숨은물벵뒤 습지는 여러 다른 생태계에 비해 접근이 용이하지 않아 생물다양성이 높다고 여겨져 왔으나, 세균의 다양성과 새로운 종에 대한 보고는 전혀 이루어지지 않았다. 본 연구에서는 제주도 한라산의 고산 습지인 숨은물벵뒤 습지에서 담수 및 토양시료를 채취하여 Bacteroidetes, Firmicutes, Actinobacteria문에 속하는 세균을 분리하였다. 분리된 세균 중 위의 3개의 문에 속하는 균주의 16S rRNA 유전자 염기서

Bacillus thuringiensis (Bt) strain K4 was isolated from fallen leaves which had been collected at a forest stand in Mungyeong city, Republic of Korea. The flagellated vegetative cells of Bt K4 were agglutinated with the H3 reference antiserum among 55 reference H-antisera. In a further test to identify subfactors, 3b and 3d monospecific antisera were reactive to the cells, followed up with introducing a novel serogroup of 3a3b3d, designated as serovar mogi. The strain K4 had mosquitocidal activity against Dipteran larvae, Anopheles sinensis and Culex pipiens pallens, with no Lepidopteran toxicity observed. The SDS-PAGE profile of K4 crystal protein, ovoidal-shaped, included several bands ranging from 30-75 kDa. Four putative peptides, Cry19Ba, Cry40ORF2, Cry27Aa and Cry20Aa were detected from the bands by a nano-LC-ESI-IT MS analysis. Through a thermal asymmetric interlaced PCR, cry19Ba, cry40ORF2 and cry27Aa genes were partially cloned from K4 strain. Three cry genes were further found in the strain by a 454 pyrosequencing, ending up to showing 58%, 39% and 84% homology in amino acids with Cry56Aa, Cry8Ba and Cry39ORF2 toxins, respectively. This novel 3a3b3d type strain, B. thuringiensis subsp. mogi, can be used as a good resource for studying unknown mosquitocidal cry genes.

Bursaphelenchus xylophilus is known to be a major pathogen of the pine wilt disease (PWD). The pathogenecity of PWD is considered to be related to cell wall-degrading enzymes such as endoglucanases, expansins and pectate lyases (PELs). Two PELs, Bx-PEL1 and Bx-PEL2 are known to be expressed in B. xylophilus and regarded as a putative pathogenic factor. Recently, we developed stage-specific expressed tag library of B. xylophilus and identified a novel Bx-PEL3. We cloned Bx-PEL3 gene with RT-PCR, which showed high similarity to previously reported Bx-PELs. Phylogenetic analysis revealed that PEL3 was much closer to Bx-PELs than any other PELs. PEL3 has a conserved intron site as found in other Bx-PELs in the genomic DNA. Quantitative real-time PCR analysis revealed that Bx-PEL1 and Bx-PEL2 were more predominant in B. xylophilus than the Bx-PEL3. Recombinant Bx-PEL3 showed the activity for polgalacturonic acid and its physical conditions such as PH and Ca2+concentration for optimized activity were 9.0 and 0.5 mM, respectively. The localization of PEL3 transcript is the anterior body of B. xylophilus, near the esophageal gland. Taken together, these results suggest that a novel PEL3 gene is biochemically functional and can play a role as a putative pathogenic factor like other PELs.

In the previous molecular cloning study from human salivary gland cDNA library novel clones (C75‐014, C76‐022) were known as candidate genes for proline rich proteins by GenBank data base search and RNA in situ hybridization. C75‐014 and C76‐022 genes were characterized as those expressing excretory basic proteins primarily composed of alanine, proline, and leucine residues, mimicking basic proline‐rich proteins (bPRPs) with helical structures and multiple consensus sequences of phosphorylation sites. In the immunohistochemical stainings using polyclonal antisera against each C75‐014 and C76‐022 peptide showed strong reaction in the secretory granules of striated and excretory ducts. And in Western blot for the different salivary specimens relatively distinctive bands appeared at lower molecular weight, ranging about 15‐50 kDa. This study was aimed to identify the molecular characteristics of C75‐014 and C76‐022 proteins, which showed properties of basic proline rich protein. These data suggest that C75‐014 and C76‐022 are candidate genes for proline rich proteins in human salivary gland, which may play a role for protecting and stabilizing the mucosal epithelium against numerous proteolytic damages and stresses.

Novel unsaturated polyester composites with PAN-based nanofiber, stabilized PAN nanofiber, and carbonized nanofiber webs have been fabricated, respectively, and the effects of the nanofiber web content on their electrical resistivity, the thermal stability, dynamic storage modulus, and fracture surfaces were studied. The result demonstrated that the introduction of just one single layer (which is corresponding to 2 wt.%) of the carbonized nanofiber web to unsaturated polyester resin (UPE) could contribute to reducing markedly the electrical resistivity of the resin reflecting the percolation threshold, to improving the storage modulus, and to increasing the thermal stability above 350℃. The effect on decreasing the resistivity and increasing the modulus was the greatest at the carbonized PAN nanofiber web content of 8 wt.%, particularly showing that the storage modulus was increased about 257~283% in the measuring temperature range of -25℃ to 50℃. The result also exhibited that the carbonized PAN nanofibers were distributed uniformly and compactly in the unsaturated polyester, connecting the matrix three-dimensionally through the thickness direction of each specimen. It seemed that such the fiber distribution played a role in reducing the electrical resistivity as well as in improving the dynamic storage modulus.

The epigenetic therapy of cancers is emerging as an effective and valuable approach to both chemotherapy and the chemoprevention of cancer. The utilization of epigenetic targets that include histone methyltransferase (HMTase), Histone deacetylatase, and DNA methyltransferase, are emerging as key therapeutic targets. SET containing proteins such as the HMTase Setd1b has been found significantly amplified in cancerous cells. In order to shed some light on the histone methyl transferase family, we cloned the Setd1b gene from Mus musculus and build a collection of vectors for recombinant protein expression in E.coli that will pave the way for further structural biology studies. We prospect the role of the Setd1b pathway in cancer therapy and detail its unique value for designing novel anti-cancer epigenetic-drugs.

술폰화 폴리아릴렌에테르술폰(SPAES) 고분자 전해질막은 상온(25℃, 100%RH)에서 우수한 수소이온전도도를 나타내는 반면 고온-저가습(120℃, 48%RH) 조건에서 나피온212 보다 낮은 수소이온전도도 값을 나타낸다. 이러한 단점을 극복하기 위해 수분 보유능력이 뛰어난 tetraethyl orthosilicate (TEOS)를 50, 100, 150, 200% 포함하는 SPAES 복합막을 제조하고 각각의 특성을 고찰하였다. FT-IR 및 TEM을 이용한 분석 결과 복합막 내에서 TEOS가 축합반응을 통하여 Si-O-Si 형태로 연결되었음을 확인하였으나, 입자 형태가 성장되지 않고 oligomer 형태로 이루어져 있음을 확인하였다. 또한 이러한 silicon dioxide 화합물이 복합막 내에서 균일하게 잘 분산되어 있음을 EDS 분석을 통해 확인하였다. TEOS를 함유한 복합막의 경우, TEOS의 수분 유지능력에 의해 높은 온도까지 휘발되지 않는 bound water의 함량이 증가함에 따라 고온에서도 높은 전도도를 유지 할 수 있었다. 이에 따라 TEOS 200% 함유된 복합막(ST200)은 120℃, 48%RH에서 나피온보다 높은 수소이온 전도도(0.015 S/cm)를 나타내었다. 또한 순수 SPAES (ST0) 단일막 보다 무기물 첨가로 인해 열 안정성이 증가하였음을 알 수 있었다.

In the previous molecular cloning study from human salivary gland cDNA l ibrary a novel clone (C77-091) was known as a candidate gene for antimicrobial protein by GenBank database search and RNA in situ hybridization. This study is aimed to identify the molecular characteristics of C77-091 protein, which showed an antimicrobial activity on E.coli, thereby named as salivary antimicrobial protein (SAMP). SAMP consisted of a typical hydrophobic amino acid rich domain in the N-terminus, a cluster of basic amino acids, carbohydrate attachment site, a possible transglutaminase catalyzed cross-linking site, and multiple consensus sequences of phosphorylation site in the C-terminus. Western blot analysis of human organs and tissue with the monospecific antibody to the synthetic SAMP peptide showed strong interacting protein from the extracts from submandibular gland and parotid saliva but absent in the mixed saliva, and the immunohistochemical staining detected a strong positive regions in the secretory granules in the luminal cytoplasm of interlobular ductal cells of salivary gland. The SAMP was also distributed in the human sebaceous gland and prostate. These data suggest that C77-091 named SAMP gene is a novel antimicrobial protein in human salivary gland, which may play a role for the innate immunity by protecting and stabilizing the mucosal epithelium to maintain homeostasis of oral mucosa.

To identify genes that are differentially expressed, we compared the mRNA expression profile of Harmonia axyridis larvae untreated and treated with LPS. We extracted mRNAs from the larvae with or without LPS treatment, and subjected them to ACP RT-PCR analysis using a combination of 120 arbitrary primers (ACP1-ACP120)and oligo (dT) primer (dT-ACP2). After synthesized cloning DNA from 37 DEGs, it practiced the sequencing homology analysis using BLAST search. Among the 37 DEGs differentially expressed, we identified a cDNA showing homology with previously reported antimicrobial peptide. A cDNA encoding a 82-mer propeptide was identified and its predicted molecular mass and pI was 9.25 kDa and 7.54, respectively. A 35-mer mature peptide was also selected and named herein as Hamoniasin. The antimicrobial activity of chemically synthesized peptide (Mou def 1~8) against human bacterial pathogens was investigate. the result showed all bacteria strains were susceptible to Mou def 2,8 with MIC values in the 32 uM range. And biological changes of the respective cells according to peptide (Mou def 8) treatment were compared. MTT assay was tested that treatment of Mou def 8 decreased cell viability in AML-2, Jurkat, U937 (maximum 200ug/ml, 24hours). That is, fragmentation of DNA, typical characteristics observed in the process of apoptosis, was confirmed in the nucleus of cells dying owing to Mou def 8 treatment.

The Bacillus thuringiensis strain K4 was isolated from fallen leaves, sampled in a forest region of the city of Mungyeong, Korea. The flagellated vegetative cells of B. thuringiensis strain K4 were agglutinated with the H3 reference antiserum and further, agglutinated with 3b and 3d monospecific antisera but non-reactive for 3c and 3e factor sera. These results create a new serogroup with flagellar antigenic structure of 3a3b3d, designated serovar mogi. The strain K4 showed high activity against dipteran larvae, Anopheles sinensis and Culex pipiens pallens while no lepidopteran toxicity. It produced a single ovoidal-shaped parasporal crystal whose SDS-PAGE protein profile consisted of several bands ranging from 75 to 30 kDa. Through the protein identification by nano-LC-ESI-IT MS analysis, the putative peptides of Cry19Ba, Cry40ORF2, Cry27Aa and Cry20Aa were detected. In contrast to the plasmid profile of B. thuringiensis H3 serotype strains, the strain K4 contained only a large plasmid (~100 kb) and we cloned partial cry27Aa, cry19Ba and cry40ORF2 genes from it by thermal asymmetric interlaced PCR. Sequencing analysis showed 87%, 88% and 88% homologous with known cry27Aa, cry19Ba and cry40ORF2 genes, respectively. The new type strain, B. thuringiensis subsp. mogi (H3a3b3d) will be a good resource for new mosquitocidal cry genes.