Expression profiling was conducted with the Oryza sativa alternative splicing detecting microarray v.4 (OsASDM). Probe features are designed based on rice genome IRGSP_1.0 (http://rapdb.dna.affrc.go.jp/ ). The genome contains 37,868 genes. Among these 5,254 genes have alternative spliced sites, 11,938 transcripts. In the microarray, a total of 41,953 transcripts are covered from all the loci and 9112 alternative spliced transcripts. Four 60-nt long probes were designed from each transcript starting 60 bp ahead the end of stop codon and with shifting 30 bp so 4 probes cover 150 bp in the 3’ region of the gene. Genes from chloroplast (123) and mitochondria (74) and selection markers such as gfp, gus, hyg, bar, and kan are included. In total, he 125,956 probes were designed. To find organ specific transcripts RNA was prepared from leaf, root, panicle at 1 cm (P1cm). The signal intensity files were analyzed with limma package. Background correction and normalization were performed with libraries in the package. 13,486 genes are organ specific and 1,856 transcripts are alternatively spliced. Transcripts that specifically alternatively spliced in leaf are Os02t0197600-02_UE; Chlorophyll a-b binding protein 8, Os11t0707000-01_UE; Ribulose bisphosphate carboxylase/oxygenase, Os12t0291100-01_UE; ribulose 1,5-bisphosphate carboxylase small subunit. Transcripts that specifically alternatively spliced in root are Os03t0669100-02_UE; Deoxyuridine 5’-triphosphate nucleotidohydrolase, Transcripts that specifically alternatively spliced in tissues at P1cm are Os11t0210300-02_UE; Alcohol dehydrogenase 1, Os04t0631200-02_UE; Xyloglucan endotransglycosylase. Os03t0669100-02_UE ; Deoxyuridine 5’-triphosphate nucleotidohydrolase, Os11t0210300-02_UE ; Alcohol dehydrogenase 1, Os04t0631200-02_UE; Xyloglucan endotransglycosylase. These results show that OsASDM could be used to find alternatively spliced gene at ease.

Koji (Aspergillus oryzae) is used to ferment crude cereals of wheat to make a traditional alcoholic drink called Makkolli and industrial materials. It’s quality varies depending on the wheat quality. Four domestic wheat varieties (Kosomil, Jokyungmil, Geumgangmil, Baegjungmil) were characterized. They were found similar in pH (6.02 to 6.08) and total acid (0.105 to 0.120%) contents. However, amino acid content of Gemgangmil was the highest (4.46%) and that of Baegjungmil was the lowest (3.72%). The total bacillus number was highest in Kosomil (333×103CFU/ml) and lowest in Gemgangmil (60×103CFU/ml). On the other hand, the fungus number was 47×105CFU/ml in Gemgangmil and the other varieties had similar quantity. The content of Alpha-amlyase was the highest (500.01unit/g) in Kosomil followed by Jokyungmil and Gemgangmil, and the lowest was in Baegjungmil (353.32unit/g). The content of Glucoamlyase was the highest in Geumgangmil (5105.0unit/g) followed by Jokyungmil and Kosomil, and the lowest was in Baegjungmil (3880.0unit/g). Acid protease was the highest in Kosomil (3515.15unit/g) followed by Geumgangmil and Baegjungmil, and the lowest in Jokyungmil (1280.5unit/g). From the result, Koji made from Kosomil was found to be of superior quality.

Potato glycoalkaloids(PGAs) are potentially toxic to humans at high levels and current safety regulations have recommended that PGAs content in tubers of potato cultivars should not exceed 20 mg/100g·FW. Accordingly, it is important to determine the PGAs composition and levels on potato cultivars for food safty and the breeding for new cultivars with low levels of PGAs. The main aim of this study was to evaluate α-chaconine, α-solanine and total PGAs content in the peel and cortex portions in 24 cultivars including ‘Haryoung’, ‘Goun’, ‘Hongyoung’ and ‘Jayoung’, recently released by Highland Agricultural Research Institute. The total PGAs ranged from 3.1 to 10.1 mg/100g·FW. 75-94% of total PGAs was existed in the peel part of all cultivars. We selected two cultivars, which can be eaten wth the skin on tubers, and so used for soy sauce braised potatoes and baby potatoes for the rest area. These results will provide consumers and breeders with fundamental information about the content of PGAs in Korea major cultivars.

Rice blast caused by the fungal pathogen, Magnaporthe oryzae, is a serious disease affecting yield loss and decreasing its quality in rice production. Rice breeders in Korea have developed many japonica varieties showing resistance to blast. However, the blast resistance in most japonica varieties has broken down within a few years after they were released to farmers because of the spread of new virulent races of M. oryzae. There is the most effectiveness to look for novel resistant gene(s) that can express the resistance to broad-spectrum races in diverse environmental conditions. We identified a major QTL, qLB4.1 linked tightly to RM6352 and RM3643 in 52.6 cM region on chromosome 4 related to the resistance for isolate inoculation and nursery test, and neck blast from a Korean weedy rice, Geumleungaengmi33. This QTL explained 26.1∼28.6% and 45.3∼53.1% of total phenotypic variation by the allele of GL33 for isolate inoculation and nursery test, respectively. A line SR30058(52)-1-1 (Suweon545) that containing the QTL qLB4.1 was developed from Ilpum*4/GL33 by marker-assisted backcross method. This line showed resistant reactions to blast nursery test across regions and years, and resistance to neck blast at the hot-spot field in Jecheon. Suweon545 showed also durable resistance of lower 10% of diseased leaf areas (DLAs) in sequential planting method. This line screened by graphical mapping using 136 SSR markers that evenly distributed on 12 chomosomes. Suweon545 contained GL33 alleles of donor parent in a total of 12 loci (8.8%) including QTL region on chromosome 4. In future, Suweon545 would be useful to develop the broad-spectrum resistance variety in japonica rice breeding program.

A 67-year-old man visited our hospital with anorexia and abdominal discomfort after taking herb for 3 months. Abdominal computed tomograpy showed splenomegaly. Blood test showed elevation of serum alanine aminotransferase level, thrombocytopenia, and there was no viral or autoimmune hepatitis. Liver biopsy showed comprehensive fibrotic changes and necrosis on iver parenchyma. He recovered within 1 week after stopping the herb. There was no disease recurrence for 1 year. No case of toxic hepatitis by taking Fritillaria thunbergii Miquel has been reported. Thus, this case proved for the first time that Fritillaria thunbergii Miquel could cause drug induced liver injury.

Transposon elements are widely distributed in the plant genomes. Maize genome consists of various transposable elements that constitute as much as 80% of the genome. Transposon display (TD) is a modified from AFLP, and can be used to generate and display hundreds of genomic fragments affixed to transposons, consequently tagging transposons. We developed maize specific transposon insertion- sequence characterized amplified regions (Ti-SCAR) using Isaac and CACTA transposons. Currently, we have developed 58 dominant Ti-SCAR markers. Validation of the Ti-SCARs is being carried out using a various maize germplasm. Since AFLP is tedious and unsuitable for large scale application in MAS, the Ti-SCAR markers displayed simple binary presence or absence pattern. Thus, the Ti-SCARs can provide a fast, cheap and reliable PCR based assay. A pipeline in developing the Ti-SCAR will be presented in the poster.

xBrassicoraphanus, a new synthetic intergeneric hybrid between Brassica rapa L. ssp. pekinensis and Raphanus sativus L., also locally known as ‘Baemoochae’, is an interesting subject for studying polyploidy and genome plasticity in the family Brassicaceae, but very few genomic and cytogenetic information. Here, we analysed the chromosome complements and pairing of the most fertile lines, BB1 and BB5, using dual-color fluorescence in situ hybridization (FISH) and genomic in situ hybridization (GISH) to check their chromosomal segregation stability. The somatic chromosome complement of B. rapa was confirmed to be 2n=20 (2.8~4.8μm), of R.sativus, 2n=18 (2.0~3.3μm), and of xBrassicoraphanus, 2n=38 (2.2~5.0μm). There were eight, eight, and seventeen metacentric pairs and two, one, and two submetacentric pairs in B. rapa, R. sativus, and xBrassicoraphanus, respectively. Additionally, three, two, and five pairs of 5S rDNA and five, three, and eight pairs of 45S rDNA were observed in B. rapa, R. sativus, and xBrassicoraphanus, respectively. This suggests that both B. rapa (AA) and R. sativus (RR) genomes, particularly the rDNA arrays, co-exist in xBrassicoraphanus (AARR) genome. In meiosis I, nineteen bivalents were most frequent, and GISH analysis showed ten bivalents from the A genome. This study would provide a useful information for further genomic study of xBrassicoraphanus and its improvement as a new promising breeding variety.

The perturbation of the steady state of reactive oxygen species due to biotic and abiotic stresses in a plant could lead to protein denaturation through the modification of amino acid residues, including the oxidation of methionine residues. Methionine sulfoxide reductases (MSRs) catalyze the reduction of methionine sulfoxide back to the methionine residue. To assess the role of this enzyme, we generated transgenic rice using a pepper CaMSRB2 gene under the control of the rice Rab21 promoter with/without a selection marker, the bar gene. A drought resistance test on transgenic plants showed that CaMSRB2 confers drought tolerance to rice, as evidenced by less oxidative stress symptoms and a strengthened PSII quantum yield under stress conditions, and increased survival rate and chlorophyll index after the re-watering. The results from immunoblotting using a methionine sulfoxide antibody and nano-LC-MS/MS spectrometry suggest that porphobilinogen deaminase (PBGD), which is involved in chlorophyll synthesis, is a putative target of CaMSRB2. The oxidized methionine content of PBGD expressed in E. coli increased in the presence of H2O2, and the Met-95 and Met-227 residues of PBGD were reduced by CaMSRB2 in the presence of dithiothreitol. An expression profiling analysis of the overexpression lines also suggested that photosystems are less severely affected by drought stress. Our results indicate that CaMSRB2 might play an important functional role in chloroplasts for conferring drought stress tolerance in rice

Glucosinolates of Brassica rapa collection from Korea genebank were measured to determine total glucosinolate content and their variation of diverse glucosinolates; Around 100 accessions representing the different morphotypes and geographical origin of Brassica rapa were analysed. The principal component analysis was performed to evaluate the differences among morphotypes using the profiles of 14 glucosinolates identified from the leaves. DMRT test and box plots showed the significant difference between total glucosinolates of subspecies. Most of turnip accessions had higher gluconilates compared to the other type accessions, Chinese cabbage and pak choi. These accessions will be used for GWAS study for glucosinolate. Now they are being finger-printed by genotyping by sequencing (GBS). Among these accession, we selected a turnip accession with high amount of glucosinolate, K0466 and two Chinese cabbage accession with low amount of glucosinolate, K0015 and K0621. To analyse quantitative traits loci (QTL) for glucosinolate synthesis, these three accessions were fixed through microspore culture. Finally, six homozygous lines were selected and were crossed each other to make F1 hybrids. We just harvested F2 seeds and transferred doubled haploid plants to pots. QTL analysis for glucosinolate will be performed these F2 and DH population.

A New six-rowed Naked Barley Cultivar “Nurichal” with good coking quality was developed by cross with HB88154-B-25-1 line and Hinchalssalbory by the Winter Cereal and Forage Crop Research Div. NICS, RDA in 2010. HB15305-B-B-31-2 was selected in 2006 and designated as ‘Iksan 95’. It showed good agronomic performance in the regional yield trials (RYT) from 2008 to 2010 and was released with the name of ‘Nurichal’ possessing good water absorption and expansion. The average heading and maturing dates of ‘Nurichal’ were April 24 and May 30 in paddy field, which were two day and one day later than those of the check cultivar ‘Saechalssalbori’ respectively. The new cultivar, ‘Nurichal’, had 82cm of culm length that was 5cm shorter than that of ‘Saechalssalbori’, and 4.0cm of spike length. It showed 774 spikes per m2, 63 grains per spike, 25.0 g of 1,000-grain weight, and 793 g of test weight. ‘Nurichal’ showed a little weaker winter hardiness than those of the check cultivar, ‘Saechalssalbori’ and showed similar lodging resistance with check cultivar. It sowed stronger resistance to barley yellow mosaic virus (BaYMV) compare to check cultivar. Grain shape was small and round. Protein content was 10.3% and β-glucan content was 6.8%. Its average yield of the pearled grain in the regional yield trial was 3.84 MT/ha in paddy field, which were higher 2% than those of the check cultivar. Its water absorption was similar and expansion was higher than ‘Saechalssalbori’. This cultivar would be suitable for the area above the daily minimum temperature of -6℃ in January in Korean peninsula.

This study aims to investigate the relationship between metacognitive awareness and the use of reading strategies in L1 and L2 reading depending on the participants' L2 reading proficiency. A total of 167 Korean EFL university students participated in this study. They responded to questionnaires asking about their metacognitive reading strategies in their L1 and L2 reading for academic purposes. The findings showed that (a) there were positive relationship between L1 reading and L2 reading in terms of their use of metacognitive reading strategies, and (b) significant differences were found in the use of strategies in L1 vs. L2 reading in terms of L2 reading proficiency: L1 and L2 global strategy use in the high proficiency group, L1 and L2 support strategy use in the high, intermediate, and low proficiency groups, and overall L1 and L2 metacognitive reading strategy use in the intermediate proficiency group. There were no significant differences in L1 and L2 problem-solving strategy use in all three proficiency groups. The most influential factor in predicting overall use of L2 metacognitive reading strategies was found to be L1 global strategy use. Pedagogical implications for strategy-based reading instruction were suggested.

Barley is a good source of dietary fiber, β-glucan, which confer a number of human health benefits. The properties of a white wheat bread could be changed by adding regular and waxy barley flour in small amounts to a white wheat bread recipe. The objectives were to replace wheat flour with different levels of regular and waxy barley flour, and to examine their effects on bread qualities. Barley grains, Sassal(SS) as regular andSachalssal(SCS) as waxy cultivars, were ground usinga hammer mill equipped with 0.8 mm screen. A commercial bread wheat flour (WF) was used as a base flour. The blends with three levels (10, 20, 30%) of barley flour substitution were prepared, and the baking process was followed by the AACC official 10-10A. When barley flour substitution increased, beta-glucan was significantly increased: the highest beta-glucan in the waxy barley flour blends (0.1% in WF, 1.91% in 30% SCS). While WF bread had the highest loaf volume, substituting 20% SS did not statistically (p<0.05) affect the loaf volume, however a significantly lower loaf volume at 30% barley flour. On the other hand, the loaf volume of SCS breads lowered significantly by substitution statistically. The hardness and chewiness increased by replacing barley flour from 10 to 30% progressively: a remarkable increase in adhesiveness at 30% SCS bread. From the results, substitution of 10% barley flour regardless of regular and waxy did not affect bread volume and firmness, being suitable to use 20% SS barley flour without a significant change in loaf volume. From the nutritional point of view, substituting barley flour up to 20% would be an effective way to increase the dietary fiber on white wheat based breads.

Pearling, an important primary process on food barley utilization, refers to the gradual removal of grain tissues starting from the outer grain tissues/layers, bran, and germ. The removal of barley bran through pearling yields a bright white kernel that is ideal for various food applications. The removed grain layers are usually sold as feed. However, its use for producing various innovative food products such as high-fiber functional pasta. Here we investigated composition of pearled barley. Barley grains from two hull-less varieties, Saechalssal and Hinchalssal, were pearled to various degrees(10-60%). The composition (protein, β-glucan, fat, ash, total phenol and proanthocyanidin) of pearled barley fractions flour(PF) was determined. Protein, fat, ash, total phenol and proanthocyanidin content was decreased in PF according to increasing pearling degree. Hunter L value and whiteness was increased. β-glucan content also was increased from 3.35, 2.73% to 8.9, 9.3% in Sachalssal and Hinchlssal individually. PF of Sachalssal and Hinchalssal showed different content in all components. Protein content was the highest in 90～80% flour fraction. Total phenol, proanthocyanidin and crude fat content was the highest in outer grain layer, bran(100～90% fraction) than other fractions.

Barley (Hordeum vulgare L.) and barley byproduct, waxy and non waxy genetic type, were prepared and investigated for its biological activity. The total phenolic contents, tyrosinase and xanthin oxidase inhibition activity of the barley extracts were measured and compared with those of a barley byproducts extracts powder. The contents of total phenolic compounds of the barley byproducts, waxy and non waxy type, were 18.60 and 17.92 mg/g of sample, respectively. Inhibition rates (%) of the mushroom tyrosinase of the waxy type barley and barley byproducts extracts powder were 16.30 and 33.60% at 250 ppm, respectively. Tyrosinase inhibition activity of barley byproduct extracts regardless of waxy and non waxy type showed higher than that of arbutin (5%). The samples showed an inhibition effect of xanthin oxidase. At 2,500 ppm of sample concentration, the inhibition effect of xanthine oxidase of waxy type barley (WB), non waxy type barley (NB), waxy type barley byproducts (WBP), and non waxy type barley byproducts (NBP) was 9.92, 16.06, 14.11, and 13.86%, respectively.

This study was conducted to examine the variations of seed hull color characteristics, the oil contents and fatty acid composition in 275 sunflower germplasms. The seed hull of sunflower germplasms were classified into 4 colors of white, black, grey, and brown. The grey color of seed hull was the highest percentage of 33.8%, whereas the white color of seed hull was the lowest percentage of 5%. Average oil content was 22.5% with a range from 11.7% to 45.5%. Average saturated fatty acid contents were 6.9%, while average content of unsaturated fatty acid was 93%. The average contents of fatty acids such as palmitic acid, stearic acid, oleic acid, and linoleic acid were 4.7%, 2.2%, 55.2%, and 38%, respectively. Comparing the oil contents and fatty acids among different seed hull colors, the highest content of oil was with grey seed hull color and the lowest with white seed hull color. Saturated fatty acid were higher in brown seed hull color. Unsaturated fatty acids were higher in grey and black seed hull colors. It could be observed that there was significant negative correlation(r=-0.998**) between linoleic and oleic acid content, and also L-value(Lightness of seed hull color) showed significant negative correlations with oil content, oleic acid content and linoleic acid content.

Corn (Zea mays.L) is the second leading cereal in Myanmar and an important commodity in earning farmers’ income and foreign currencies. To increase productivity, development of locally adapted better hybrid is strongly needed. For upgrading the hybrid corn research and development program, Department of Agricultural Research (DAR) invited the International Corn Foundation (ICF)/Kyungpook National University (KNU) in 2005. Under this collaborative program, research on genetic potential of exotic germplasm introduced from Nepal, Hawaii, Korea, China and IITA has been carried out in 2009 rainy season. Yield trials of 108 and 80 combinations of Myanmar lines and exotic germplasm (Normal × Normal crosses, Normal × Super-sweet) were carried out in Tatkone, Yezin (central zone), Nyaung Mon (north zone), Aung Ban (highland zone) research stations, respectively. These experimental crosses are produced in Korea and Cambodia, 2008. Two to five outstanding hybrids have been selected for three respective zones. Selected hybrids yielded 50-100% more than the best commercial hybrid, CP888 imported from Thailand.The hybrids are tolerant to Rhizoctonia blight in the Tatkone, Exserohilum turcicum blight in Aung Ban, and E. turcicum and stem borers in the Nyaung Mon. A couple of normal super-sweet corn hybrids were selected for nutrition, sugar and vitamin A+. These results point out that introgression of exotic alleles has a potential to increase the heterotic response in yield and biotic resistance. Thus, an understanding of the heterotic relationship between adapted and exotic is needed to exploit exotic germplasm intelligently.