본 연구는 국내의 세 품종 돼지에 대하여 혈통자료를 이용한 근교계수와 유전체자료를 이용한 근교계수를 분석하고 비교하기 위하여 수행되었다. 분석에 이용된 혈통자료는 듀록, 랜드레이스 및 요크셔 종에서 각각 137,302두, 228,651두와 657,079두였고, 유전체자료의 경우 Illumina Porcine SNP 60K bead chip V2를 이용하여 수집하였으며 세 품종에서 각각 2,567개, 7,594개 및 12,906개의 자료를 이용하였다. 듀록, 랜드레이스와 요크셔에서 혈통자료를 이용하여 추정된 근교계수는 각각 0.04, 0.02 및 0.02였으며, 유전체자료를 이용하여 추정된 근교계수는 각각 0.184, 0.098 및 0.063이었다. 듀록에서 두 근교계수의 상관이 0.466으로 가장 높게 나타났다. 본 연구를 통하여 혈통완성도는 유전체 정보를 이용하여 보완할 수 있음이 확인되었으며, 유전체 정보는 집단의 유전자원 관리에도 활용도가 높아 국내 양돈산업의 근친도 관리에서 중요한 역할을 할 것으로 기대된다.
Rapid resistance detection of resistance level is most important step to manage the resistant population in Tetranychus urticae in Korea. Residual contact vial bioassay (RCV) and quantitative sequencing (QS) methods were employed to determine the resistance level and applied to measure the resistance level of 46 field population collected from rose, strawberry and apple trees. Most populations exhibited multiple resistance pattern to various types of acaricides. Especially, the resistance levels in mites from rose cultivation area were higher than those from strawberry and apple cultivation areas. The resistance level detection would provide a useful parameter enabling the proactive action for a proper resistant population management for T. urticae.
경기도 8개 지역에서 2010년부터 2012년 동안 식균성인 노랑무당벌레의 발생기주를 조사한 결과, 흰가루병에 감염된 12종의 식물에서 관찰 이 되었다. 특히 가장 밀도가 높았던 배과원에서 노랑무당벌레는 7월 상순부터 11월 상순까지 발견되었다. 식균성인 노랑무당벌레의 장내에서는 흰가루병 균사나 포자 외에 다른 먹이의 흔적이 발견되지 않았고, 알과 번데기를 제외한 전 발육단계에서 균을 섭식하는 특성을 볼 때 절대적 식균성 곤충으로 생각된다. 25℃에서 오이 흰가루병균을 섭식한 노랑무당벌레의 발육기간은 알, 유충, 번데기, 성충이 각각 3.9, 10.4, 4.1, 37.7일 이었고, 발육단계별 오이 흰가루병 섭식량은 45.6, 144.4, 372.2, 628.1, 473.7 mm 2로 4령, 성충, 3령, 2령, 1령 순으로 많았다. 본 연구를 통해 노랑무당벌 레의 오이 흰가루병에 대한 섭식능력을 바탕으로 향후 유용 토착천적으로써 대량사육기술, 저독성 약제 선발 등 작물 흰가루병 종합방제기술(IPM) 에 대한 연구가 필요하리라 사료된다.
Transcriptome analysis was conducted for the identification of genes associated with insecticide resistance in Frankliniella occidentalis. Resistant strain (FO_RDAHC) exhibited 39.2- ~ 533-fold resistance to acrinathrin, spinosad, emmamectin benzoate and thiamethoxam compared with a susceptible FO_RDA strain. Average 7.6 million reads (± 5,068,895 reads) were obtained from the pyrosequencing and were assembled into the draft CDS database. Gene annotation was conducted by BLAST (UniProt), Pfam, FUNCAT and COG analysis. In the deferentially expressed gene (DEG) analysis, 838 genes were up-regulated and 815 genes were down-regulated over 2-fold ratio in FO_RDAHC strain. Highly up-regulated genes included genes encoding several cuticle-related proteins, cytochrome P450s, esterases and transporter genes. An autotransporter protein gene exhibited the highest up-regulation (596 fold) whereas a GMC oxido-reductase revealed the highest down-regulation (12 fold). Further study would be necessary to validate the actual transcript levels of DEGs and to investigate their functional roles in insecticide resistance.
An easy and rapid resistance detection protocol for the Western flower thrips Frankliniella occidentalis was established based on the residual contact vial bioassay (RCV), in which insecticide resistance levels can be estimated at 8 h-post treatment of diagnostic doses. The RDA strain was used as a reference susceptible strain, which has been reared under laboratory conditions over 10 years without exposure to any insecticides. Seven insecticides were tested for the determination of diagnostic dose. Among them, five insecticides (chlorfenapyr, acrinathrin, spinosad, emmamectin benzoate and thiamethoxam, ranged as 0.03 ~ 0.42 μg-1cm2) were applicable to the RCV. However, two insecticides (omethoate and imidacloprid) were not able to be used for the RCV because the treated inner surface of glass vials by these insecticides were too viscous, causing non-specific mortality. The RCV detection kit was employed for the estimation of resistance levels for the five insecticides in five local populations. Almost field-collected populations revealed high levels of resistance to the four insecticides (acrinathrin, spinosad, emmamectin benzoate and thiamethoxam) by showing less than 50% mortality. The baseline resistance detection by RCV method will facilitate the selection of proper insecticides for farmers to manage insecticide resistant-populations of F. occidentalis.
Establishment of rapid resistance level detection system is essential step to adopt the adaptive management for the control of various kinds of resistant pest population. Here, we established acaricides resistance detection methods based on residual contact vial bioassay (RCV) and quantitative sequencing methods (QS), and applied to determine the resistance levels from several populations in two-spotted spider mite, Tetranychus urticae, which has been considered as major notorious pest in rose cultivation area in worldwide. 12 acaricides were applicable to the RCV among 19 representative acaricides by showing the dose-dependent mortality within 8 hr, suggesting the acaricide suitability for the RCV might be varied by toxicity mechanism in each acaricides. The QS regression was established for 10 point mutations associated with five number of acaricides resistance such as organophosphate, pyrethroid, abamectin, bifenazate and etoxazol. The 95% prediction level was ranged from 10.8±5.4∼92.2±3.2%. The resistance levels were determined by above two detection methods from a total 12 strains. The laboratory-reared populations were revealed high susceptibility with low resistance allele frequencies to some acaricides, suggesting the several acaricides would be chosen for the control of those populations. However, the field-collected populations were exhibited a severe cross resistance with low susceptibility and high resistance allele frequency to almost tested acaricides, suggesting the current acaricides resistance levels are serious in rose cultivation area in Korea. The RCV and QS methods would be useful for the rapid and accurate collection of valuable information associated with acaricide resistance.
Spider community was surveyed at Nakdonggang River which is the longest river (525 km and 23,384 km2) located East-south part of Korea. Nakdonggang river is developing for water management and environmental conservation including restoration of river ecosystem under “The Four-River Restoration Project”. Sampling was made 3 occasions from June to August in 2009. Eight survey sites were selected from both sides of river in Andong, Sangju, Gumi and Seongju prefectures. Spiders were collected with sweep net for on the plants above ground and pitfall traps for on the ground. A total of 94 species of 71 genera in 24 families were identified from 805 collected spiders. Species richness was high in Salticidae (18 species, 19.1%), Araneidae (12 species, 12.8%), Lycosidae (9 species, 9.6%) in order. Wandering spiders (55 species occupied 58.5%, 493 individuals occupied 61.2%) were higher than webbing spiders (39 species occupied 41.5%, 493 individuals occupied 61.2%) in species richness and abundance. Dominant species were Tetragnatha praedonia (Tetragnathidae) and Neoscona adianta (Araneidae) in webbing spiders, and Anahita fauna (Ctenidae), Pirata procurvus (Lycosidae) and Gnaphosa kompirensis (Gnaphosidae) in wandering spiders with abundance. Collectively, most spiders collected from this study were water preferring spiders and showed different community structure compared to other reports from terrestrial spider fauna. Present result will bevaluable to compare the effect of development on the arthropod fauna after completion of the project.
The cotton aphid, Aphis gossypii Glover (Hemiptera: Aphididae), is one of the major insect pests of cucumber, Cucumis sativus L. The spatial distribution and occurrence of Aphis gossypii Glover on greenhouse cucumber, Cucumis sativus L., were studied to provide an efficient and reliable sampling plan for its control. A highly clumped pattern was observed among plants (TPL b = 1.63) within a greenhouse. To develop a sampling plan for visual enumeration, leaves within plants were selected by different percentages of leaves (eg., 3rd and 6th, 6th and 9th leaf,…from the bottom of the plant) and then compared the accuracies and efficiencies by relative net precision (RNP). The results indicated that selecting leaves from the bottom of the plant by systemic sampling methods were relatively high as other sampling methods.
본 연구는 BSC의 성공적 구축과 활용에 있어 최근 변화하는 경영환경에 적절하게 대응하고, 기업의 경영활동에서 비재무적 요소가 차지하는 중요성을 감안하여 무형적자원의 대표적 요소인 R&D 지출과 관련하여 BSC의 KPI를 개발하고, 개발된 지표의 효용성을 실증분석을 통해 검정하고자 하였다. 본 연구를 통해 BSC의 KPI로써 개발된 PEI(Patent Efficiency Index)는 R&D 지출과 R&D의 output 개념인 특허와의 상관성을 고려하여 특허의 효율성 측면에서 만들어 졌으며, 기존의 R&D관련 KPI가 가진 문제점을 해결하고, R&D 성과측정에 관한 새로운 KPI개발을 시도 하였다는 점에서 연구적 의의가 있다고 하겠다. 또한 지표의 효용성에 대한 실증분석 결과, 논문의 관심변수인 PEI는 종속변수인 기업경영성과의 대용치로 나타내어진 ROA(총자산이 익률)과 토빈Q에 각각 유의한 양의 영향을 미치는 것으로 나타났으며 그동안 기존 연구들에서 많은 관심을 가져왔던 R&D 지출보다 R&D의 성과측정지표로서의 설명력이 더 높은 것으로 나타났다. 이상 결과를 통해 개발된 PEI는 기존의 R&D 지출이 기업성과에 미치는 영향을 설명하는데 있어 설명하지 못하는 추가적인 설명력을 가진다고 할 수 있다. 나아가 이 지표를 통해 기업이 얼마나 효율적인 R&D 활동을 하고 있는지 알 수 있으며, 이는 기업의 R&D 활동의 효율성이 높을 때 기업의 가치나 성과가 높아진다는 것을 시사한다. 본 연구는 기업의 R&D 지출과 기업경영성과 간의 관련성을 특허와 R&D 지출의 효율적인 측면을 측정한 PEI를 통하여 직접적으로 입증함으로써 기존의 R&D 비용 외에 기업의 기업경영성과를 가늠하고 판단할 수 있는 중요한 지표로 쓰일 수 있다는 것을 규명할 수 있을것으로 기대된다.
This study was conducted to investigate the altitudinal distribution of the ground beetle community in a mountain area during 2007 to 2009, and to examine what habitat characters are most relevant to the distribution of mountain ground beetle species, and finally to identify potential biological indicators for monitoring in forest. The study area was Mt. Sobaeksan National Park (1439 m elevation), in Punggi-up, Gyeongsangbuk-do, Korea. Ground beetles were collected by pitfall traps, which were installed along the altitudinal gradient 437, 757, 1100 and 1420 m. In total, 3,259 individuals were identified as 32 species in 18 genera. The dominant species were Synuchus cycloderus (29.4%), Eucarabus sternbergi sobaeksanensis (15.4%) and Pterostichus orientalis (9.7%) in order. Overall, the ground beetle community structure was different along the altitude (similarity 65.2%) by NMDS ordination, but also were clustered into 2 groups, 437 and 757 m, and 1100 and 1420 m (similarity 57.9%). Therefore, the ground beetle assemblage could provide basic information for forest management. In this study, some ground beetle species were suggested to potential biological indicators along altitudinal gradient.
Strawberry, Fragaria ananassa Duchesne, is one of the important horticultural crops cultivated in greenhouses. Tetranychus urticae is one of major strawberry pests, and Neoseiulus californicus and Phytoseiulus persimilis have been used as biological control agents for control of T. urticae. The interactions between T. urticae and N. californicus and between T. urticae and P. persimilis were investigated to compare their control efficiency for T. urticae on a spatially-structured strawberry leaf disc area at different temperatures and on different treatments. The experimental arena was an array of leaf discs (3 cm diameter) placed upside down on a water-saturated cotton pad in an aluminum pan (17.4 x 21.5 cm). Twenty leaf discs (4 x 5) were placed adjacent each other for allowing dispersal of T. urticae and its predatory mites. The temperature conditions were 20, 25, and 30°C and there were six different treatments. The overall population densities of T. urticae were influenced by temperature (20, 25, and 30°C) in N. californicus treatment. In the same temperature condition, P.persimilis was more effective than N. californicus to control T. uritcae. Two predator systems were better than one predator systems to suppress the population density of T. urticae at 25°C. Some results of this study could be used to understand the spatial association of T. urticae and its predatory mites in greenhouse crops and fields.
The study was conducted to explore whether environmental differences, in this case the physical characteristics of abaxial leaf surfaces of strawberry cultivars ('Maehyang' and 'Sulhyang' cultivars), affect the functional response of adult female N. californicus preying on immature stages (egg, larva and nymph) of T. urticae. We also evaluated the functional response of N. californicus to eggs of T. urticae at different temperatures (15, 20, 25, 30 and 35℃). We conducted a logistic regression of the proportion of prey consumed as a function of initial prey density to identify functional response types, and used nonlinear squares regression and the random predator equation to estimate attack rates and handling times. The functional response of adult female N. californicus to T. urticae was not influenced by non-glandular trichomes and epicuticular waxes on the abaxial leaf but was affected by temperature. Overall, the functional response of adult female N. californicus exhibited a type 2 functional response to T.urticae. The handling time of N. californicus was highest (1.9970) against T. urticae nymphs. The attack rate did not change much at 15-30℃, but the handling time decreased linearly with increasing temperature. At 35℃, the attack rate was highest (0.1876) and the handling time was lowest (0.9296). The results of this study may be used to evaluate the potential of N. californicus to suppress T. urticae and to estimate parameters for relevant prey-predator models.
To establish a rapid diagnosis method for the monitoring of acaricide resistance in the two-spotted spider mite, Tetranychus urticae, we evaluated the performance of residual contact vial (RCV) method as a routine bioassay for T. urticae by using two widely used acaricides, abamectin and tebupenpyrad. Appropriate concentrations of test acaricides were dissolved in acetone and evenly coated (100 μl) onto the inside wall of a 4-ml glass vial using a rolling machine. The average survival times in untreated control vial was longer than 12 hrs in the absence of food or water regardless of cap being closed or open. Webbing behavior of mites inside the vial, which may interfere with maximum chemical contact, began to be observed from 8 hrs post treatment. The minimum concentrations causing 100% mortality within 8 hrs posttreatment in a susceptible strain of T. urticae were determined to be 30 and 60 ppm in abamectin and tebupenpyrad, respectively. Dose-response curve was significantly affected by temperature in both acaricides, in which the knockdown rate increased greatly as temperature increased. The endpoint mortality at 6-8 hrs posttreatment, however, was not significantly affected by temperature. Nymphal stage of mites showed more rapid intoxication response than adults but endpoint mortality at 6-8 hrs posttreatment was not substantially different between developmental stages. When compared with the results from conventional spray method, RCV method showed moderate to high correlation coefficients (r=0.51~0.98), suggesting that it is a reliable in determining susceptibility of T. urticae. The vial-coated pesticides were stable at least one year when stored at -20°C as determined by LC-MS/MS analysis. Moreover, there was no significant difference in the bioassay results in repeated experiments with three different persons, indicative of high reproducibility of RCV. The RCV diagnostic kit, when used by farmers on site, should provide crucial and essential information for the selection of most suitable acaricides for different field populations of T. urticae.
A quantitative sequencing (QS) protocol that detects the frequencies of sodium channel mutations (M815I, T917I and L920F) responsible for knockdown resistance in permethrin-resistant head lice was tested as a population genotyping method. Genomic DNA fragments of the sodium channel α-subunit gene that encompass the three mutation sites were PCR-amplified from individual head lice with either resistant or susceptible genotypes, and combined together in various ratios to generate standard DNA template mixtures for QS. Following sequencing, the signal ratios between resistant and susceptible nucleotides were calculated and plotted against the corresponding resistance allele frequencies. Quadratic regression coefficients of the plots were close to 1, demonstrating that QS is highly reliable for the prediction of resistance allele frequencies. Prediction of resistance allele frequencies by QS in several globally collected lice samples including 12 Korean lice populations suggested that permethrin resistance varied substantially amongst different geographical regions. Three local populations of Korean lice were determined to have 9.8-36.7% resistance allele frequencies, indicating that an urgent resistance management is needed. QS should serve as a preliminary resistance monitoring tool for proper management strategies by allowing early resistance detection.
Developmental periods of sweet potato whitefly, Bemisia tabaci(Gennaius) Q-biotype, were investigated on three host plants- sweet bell pepper (Capsicum annuum L.), eggplant(Solanum melongena L.) and oriental melon(Cucumis melo L. var. makuwa MAKINO). Egg and nymph development of B. tabaci were studied within temperature ranging of 15℃-35℃ by 2.5℃ under photoperiod 16:8(L:D). Egg period of B. tabaci was the shortest at 32.5℃ and nymphal period was shortest at 27.5℃ on sweet bell pepper. Nymphal period of B. tabaci on eggplant was the shortest at 27.5℃ as well. On the other hand, nymphal period of B. tabaci was shortest at 30℃ and 32.5℃. Lower temperature threshold and effective degree-day for completing egg development on sweet bell pepper were estimated as 13.11, 91.95, respectively. Lower threshold temperature of nymphal stage on sweet bell pepper, eggplant, oriental melon were estimated as 13.01, 13.39, 12.31,respectively. Degree-days required to complete nymphal stage on sweet bell pepper, eggplant, oriental melon were estimated as 191.22, 164.41, 190.34, respectively. The relationships between development rates of egg and nymph were well described by poikilothermal rate function and weibull function. The fitted curves will be used as input for a simulation model of the population dynamics of B. tabaci.