The present study aimed to analyze the metaproteome of the microbial community comprising harmful algal bloom (HAB) in the Daechung reservoir, Korea. HAB samples located at GPS coordinates of 36°29’N latitude and 127°28’E longitude were harvested in October 2013. Microscopic observation of the HAB samples revealed red signals that were presumably caused by the autofluorescence of chlorophyll and phycocyanin in viable cyanobacteria. Metaproteomic analysis was performed by a gelbased shotgun proteomic method. Protein identification was conducted through a two-step analysis including a forward search strategy (FSS) (random search with the National Center for Biotechnology Information (NCBI), Cyanobase, and Phytozome), and a subsequent reverse search strategy (RSS) (additional Cyanobase search with a decoy database). The total number of proteins identified by the two-step analysis (FSS and RSS) was 1.8-fold higher than that by one-step analysis (FSS only). A total of 194 proteins were assigned to 12 cyanobacterial species (99 mol%) and one green algae species (1 mol%). Among the species identified, the toxic microcystin-producing Microcystis aeruginosa NIES-843 (62.3%) species was the most dominant. The largest functional category was proteins belonging to the energy category (39%), followed by metabolism (15%), and translation (12%). This study will be a good reference for monitoring ecological variations at the meta-protein level of aquatic microalgae for understanding HAB.
To identify rice (Oryza sativa L.) cultivars suitable for Italian ryegrass (Lolium multiflorum Lam.)–rice double cropping systems, we investigated the yield and grain quality of four different midseason maturing rice cultivars (‘Daebo’, ‘Haepum’, ‘Haiami’, and ‘Samdeog’) and four midseason-to-late maturing rice cultivars (‘Hyunpoom’, ‘Saeilmi’, ‘Saenuri’, and ‘Samkwang’) in single rice cropping and Italian ryegrass–rice double cropping systems in paddy fields of Miryang, South Korea. We found that organic matter and available P2O5 content slightly decreased, whereas Na content increased, in the soil where Italian ryegrass was cultivated during winter compared to that in the soil that remained fallow during winter. The pH, electrical conductivity, organic matter, and contents of K+, Ca2+, Mg2+, and Na+ decreased, whereas the available P2O5 content slightly increased, in the soil where rice was harvested in both single and double cropping systems. However, compared to the optimum soil conditions for rice cultivation, available P2O5 and K+ content were high and Mg2+ content was low in both single and double cropping systems. At the heading stage, the culm length and leaf color slightly increased in most of the rice cultivars, whereas the panicle length and number slightly decreased, in the double cropped system. After harvesting, spikelet number and milled rice yield did not show a significant difference between single and double cropping systems. However, the ripened grain rate and weight per thousand grains increased slightly in the ‘Saeilmi’ and ‘Samkwang’ cultivars but remained either stable or slightly low in other cultivars in the double cropping system. The milled rice yield was high (> 500 kg/10a) in ‘Daebo’ and ‘Haepum’ among midseason maturing rice cultivars, and in ‘Saeilmi’ and ‘Saenuri’ among midseason-to-late maturing rice cultivars, in both single and double cropping systems. The head rice rate was high in midseason maturing rice cultivars in the double cropping systems, reaching > 70% in ‘Haepum’ and ‘Haiami’ cultivars, whereas it decreased in most midseason-to-late maturing rice cultivars (excluding ‘Samkwang’ cultivar), in double cropping systems. Particularly, it exceeded > 70% in the ‘Saenuri’ cultivar in both single and double cropping systems. The protein content in milled rice increased, whereas the amylose content either remained stable or slightly increased, in double cropping systems. The Toyo taste value decreased in all midseason-to-late maturing rice cultivars and slightly increased in the ‘Daebo’ and ‘Haiami’ cultivars among midseason maturing rice cultivars in double cropping systems. However, Toyo taste values in the ‘Haepum’, ‘Haiami’, and ‘Saenuri’ cultivars exceeding > 80% in both single and double cropping systems. Therefore, we recommend ‘Haepum’, ‘Haiami’, and ‘Saenuri’ cultivars as candidates for Italian ryegrass–rice double cropping systems due to high yield, head rice rate, and Toyo taste value.
The physicochemical properties of soil and the yield and quality of rice (Oryza sativa L. cv. Sailmi) were assessed using Italian ryegrass (Lolium multiflorum Lam. cv. Kowinearly)-rice double cropping systems in the paddy fields at Goseong and Miryang in southern Korea. The average temperatures during the ripening period were approximately 1 °C higher than the optimal temperature for rice ripening and the sunshine duration was reduced by frequent rainfall. Consequently, it was slightly below the optimal conditions required for rice ripening. In the soil at Goseong, winter Italian ryegrass cropping increased the pH, electrical conductivity, and the contents of organic matter, total nitrogen (T-N), available P2O5, K, Ca, and Mg than winter fallowing. Particularly, the contents of T-N and available P2O5increased significantly. In the soil at Miryang, Italian ryegrass slightly increased the electrical conductivity and the T-N, Mg, and Na contents. Therefore, winter Italian ryegrass cropping improved the physicochemical properties of paddy soils; however, Italian ryegrass-rice double cropping slightly reduced the culm length at both Goseong and Miryang, without markedly changing the panicle length or number compared to fallow-rice cropping. Furthermore, at Goseong, Italian ryegrass-rice double cropping slightly decreased the spikelet number and milled rice yield, and increased the ripened grain rate; however, at Miryang, contrasting results were observed. In addition, fallow-rice cropping revealed no differences in the head rice or opaque rice rates. The protein content was slightly increased in Italian ryegrass-rice double cropping, without significant changes in the amylose content or Toyo value, compared to that in fallow-rice cropping. The peak and breakdown viscosities were slightly decreased. These results indicate that winter Italian ryegrass cropping might alter rice taste but may not exhibit remarkable negative effects on rice cultivation. Therefore, Italian ryegrass-rice double cropping system is recommended for paddy fields in southern Korea. Nevertheless, to increase the rice yield and quality, fertilization standards for rice cropping that consider the changes in the T-N and organic matter contents in paddy fields caused by winter Italian ryegrass cropping need to be established.
For high-quality colored rice production, the cultivation environment is a critical factor. The major environmental factor is temperature, which includes the accumulated and average temperature during vegetative and reproductive stages. Generally, during the cultivation period, the temperature can be controlled by shifting the transplanting date. This study was carried out to determine the optimum transplanting date for high-quality red-colored rice production. Four red-colored rice varieties (Jeokjinju, Jeokjinjuchal, Hongjinju, and Gunganghongmi) were used as test materials. The transplanting dates were May 20 and June 5, 20, and 30 in 2015~2016. The most variable factor controlled by the transplanting date was the grain filling rate. The varieties transplanted on June 30 showed low yields owing to the decrease in the grain filling rate. In contrast, the polyphenol content increased with increasing delay in the transplanting date. Collectively, these two results indicate that the optimum transplanting date was June 20. The average temperature for 30 days after the heading date (30DAH) highly affected the polyphenol content. A lower temperature during the 30DAH induced higher polyphenol contents but also caused low yield. The optimum 30DAH temperature for obtaining a higher yield and polyphenol content was 22~23°C. Using the average 30DAH and accumulated temperatures, the optimum transplanting date was calculated as June 18 to 24 in Miryang region. The optimum transplanting date of Kyeungsangnamdo region was approximately mid-June to early July, and that of Kyeungsangbukdo region was approximately early to mid-June.
‘Nunkeunheugchal’ is a waxy black rice variety that has a large embryo. The quality of black rice depends on the anthocyanin content of the rice seed coat, which is mainly determined by cultivation environment. Factors that affect the anthocyanin content include nitrogen level, planting density, transplanting date and harvesting date. This study was carried out to investigate the optimum black rice cultivation conditions by examining the effects of different nitrogen levels and planting densities. An initial study was conducted to determine the optimum nitrogen level in which four levels of nitrogen were applied to the field (0, 4, 8 and 12 kg/10a). As the nitrogen contents were increased up to 8 kg/10a, there was a concomitant increase in rice yields. However, nitrogen levels greater than 8 kg/10a, the yield was maintained at the same level. Correlation analysis indicated that the optimum nitrogen level for maximum yield was 9.6 kg/10a. In addition, anthocyanin levels showed a trend similar to that of yield, with correlation analysis indicating that the optimum nitrogen level for maximum anthocyanin content is 10.6 kg/10a.On the basis of these results, a second study was conducted to determine the optimum combination of planting density and nitrogen level. The planting densities investigated were 30 × 12, 30 × 14, 30 × 16cm and nitrogen levels were 7, 9 and 12 kg/10a. A high planting density (30 × 12cm) was shown to produce higher numbers of tillers and yield. As calculated in the first study, a nitrogen level of 9 kg/10a shown to produce the highest anthocyanin content and yield. Collectively, the results of this study indicate that a planting density of 30 × 12 cm and a nitrogen level of 9 kg/10a is the optimal combination in terms of maximizing both rice yield and anthocyanin content.
Telomeres at the end of the eukaryotic chromosomes consist of tandem repeats of (TTAGGG)n DNA sequence and shelter in protein complex. Telomeres have the essential functions in chromosome stability and genome integrity and are hence related to cell senescence and cancer. Stripped, Black and White Cattle (Endangered Korean Native Cattle) characterized by their coat color, live in the Korean peninsula. However, they are endangered, with very small populations remaining. To investigate the karyotypic pattern of chromosome and also to quantify the amount of telomeric DNA was carried out from the traditional Korean beef cattle species, HanWoo and endangered cattle bull. We quantified the amount of telomeric DNA by the Quantitative-Fluorescence in situ Hybridization (Q-FISH) technique using the telomeric DNA probe and chromosome analysis of lymphocytes was carried out using GTG-banding in 9 bull at age of 18 months. In results, we found that the normal (60, XY) male karyotype were detected in metaphase chromosomes from korean native cattle including Hanwoo, Stripped, Black and White cattle, respectively. In addition, there were no significant differences in the relative amount of telomeric DNA among the korean cattle bull. However, the relative amount of telomeric DNA of Hanwoo was slightly higher than that of White cattle. In conclusion, this study reported karytype and the amount of telomeric DNA which could serve as baseline information for comparison in conditions of physiological and health status of endangered Korean native cattle. Although we have no definitive explanations as to why this occurs, further investigations are needed to continue investigation of these animals throughout their life spans.
벼를 상온에서 이듬해 여름까지 저장 후 밥맛에 관여하는 주요 형질들을 분석한 결과는 밥맛에 관련된 주요 요인에서 품종간 차이를 나타내었다. 특히, '영호진미'는 동일한 수분조건에서 완전미율이 높고 싸라기 비율이 낮았으며, 단백질 함량이 낮고 밥의 윤기치도 높았다. 밥의 물리적 특성면에서 경도는 낮고 찰기가 높았다. 또한 보온밥솥에서 보관 후 황색도가 낮고, 갈변화가 적은 품종이었다. 식미 관능검정에서도 다른 품종보다 밥맛이 우수한 품종이었다.
한강찰 1호'는 국립식량과학원 기능성작물부에서 2006년도에 육성한 중생 복합내병충성 통일형 찰벼 품종으로 그 주요 특성은 다음과 같다. 1. 출수기는 중부평야지 및 영 호남평야지 보통기 보비재배에서 8월 13일로 신선찰벼 보다 3일 늦은 중생종이다 2. '한강찰 1호'의 주당수수는 10개, 수당립수는 156개의 수중형이고, 등숙비율은 85%, 현미 천립중은 21.2 g이다. 3. 성숙기의 엽노화는 중간 정도이며 못자리일수 50일묘 이앙 시에 불시출수가
벼 2기작 재배의 전기작 재배에서 농업적 특성 및 품질 등을 고려하여 선발한 유망계통 ‘밀양255호’의 주요 특성을 요약하면 아래와 같다. 1. 극조생 공시계통인 ‘밀양255호’의 출수기는 7월 3일로 대비품종인 ‘진부올벼’보다 2일 늦었으며, 간장과 수장은 각각 58.3 cm, 16.0 cm이며, 주당수수와 수당립수는 각각 18.0개 52.5개였다. 수량은 394 kg/10a로 12%정도 증수되었다. 2. ‘밀양255호’의 현미의 길이, 폭 및 두께는