Radish is an important root vegetable in the world, and many cultivars have been developed with various molecular marker systems to identify these cultivars. Recently developed markers for radish cultivar identification require only 11 primer pairs, but they still use conventional PCR with different annealing temperatures and time-consuming gel electrophoresis. To improve the genotyping method, we applied touchdown PCR with 11 primers with M13 tails among 105 radish cultivars. Touchdown PCR successfully generated amplicons in all 11 M13-tailed primers with a condition of annealing temperature starting from 55℃, decreased by 1°C and 33 cycles at 53°C. The 11 M13-tailed primers followed by fragment analysis produced 71 amplicons, which produced more amplicons than gel electrophoresis that produced 23 amplicons. Especially, simple sequence repeats produced more amplicons, 12 on average, than the other marker types. The present study requires less effort and provides more accurate results compared to genotyping using gel electrophoresis. Besides, a database can be established using digitized genotyping results among radish cultivars.

우리나라에서 표고버섯은 소비자의 선호도가 매우 높고, 전체 임산버섯 생산량의 약 97.7%를 차지하고 있는 매우 중요한 단기소득임산물중 하나이다. 이러한 표고버섯은 최근 신품종의 개발이 활발히 이루어지고 있어, 육종가의 권리 보호를 위하여 품종을 구분할 수 있는 분자마커 개발이 요구되고 있다. 본 연구에서는 신품종 ‘산마루2호’를 37개의 표고버섯 품종으로부터 구분할 수 있는 CAPS 마커를 개발하였다. ‘산마루2호’의 유전체에서 Scaffold 2번 1803483에 위치한 단일염기 다형성(SNP)이 확인되었고, 이 SNP를 포함하여 증폭한 DNA는 제한효소 Hhal에 의하여 특이적으로 절단되지 않아 다른 표고버섯 품종들과 구분되었다.

DNA-based markers have been used in various fields like molecular biology and crop breeding program. DNA marker is able to be used for protection of genetic resource and quantification of specific cultivar. Eleven DNA markers have been developed for Korean wheat cultivar identification in 2013-2014. 27 of 32 wheat cultivars were distinguished by 11 DNA markers. In this study, we developed four DNA markers, KWSM0012, KWSM0013, KWSM0014 and KWSM0015, derived from SSR and SNP analysis. Consequently, 32 Korean wheat cultivars were identified by 15 DNA markers. We are convinced that these new DNA markers are very useful for wheat varieties DNA fingerprinting and are able to be applied to marker-assisted selection in wheat breeding program in Korea.

본 연구는 국내에서 육성 또는 도입된 재배국화 85점을 4 개의 분자마커(SSR marker)를 이용해 유전자형을 분석하여 품 종판별에 대한 활용성을 검토하고, 유전관계를 분석하여 국화 품종 육성에 필요한 기초자료로 제공하기위해 본 실험을 수행 하였으며 결과를 요약하면 다음과 같다 1. 85점의 재배국화에 대하여 4개의 SSR 마커로 총 95개의 대립인자가 관찰되었다. 대립인자의 수는 11개 (KNUCRY-35) 에서 34개(KNUCRY-84)로 비교적 다양하게 나타났으며, 평균 대립인자 수는 23.8개였다. 유전적 다양성을 나타내는 gene diversity (GD)와 PIC 값의 범위는 0.81-0.89, 0.79-0.89로 관 찰되었다 2. 국화의 이용에 따라 재배국화를 관상국, 스탠다드국, 스 프레이국, 분화국, 화단국으로 그룹을 나눠 집단간의 유전적 다양성을 분석하였다. 각 집단의 평균 expected heterozygosity (H)와 PIC 값을 비교하였을 때 화단국이 0.25와 0.42로 가장 낮 게 나타났고 스프레이국이 0.80과 0.79로 가장 높게 나타났다. 3. SSR마커 4개 중 allele수, 특이적 allele 수, gene diversity 및 PIC 값이 높은 마커 KNUCRY-84, KNUCRY-98, KNUCRY- 77, KNUCRY-35를 단계별로 이용하여 단계별 phylogenetic tree를 작성하여 재배국화 85점을 모두 판별하였다.

새로 개발된 유색미 품종인 중모1020의 왕겨를 이용한 색소의 조성과 함량을 분석하고 생리활성을 검정한 결과, 중모1020의 왕겨로부터 최초로 페튜니딘 색소를 다량함유 하고 있음을 Mass와 UPLC등의 기기분석을 통해 동정하였 다. 중모1020의 색소 조성 중 C-3-G 함량은 29.6%인데 비해 Pt-3-G의 함량이 68.3%를 차지하여 C-3-G 함량이 82.3% 인 기존의 벼 색소의 조성과는 완전히 다름을 보였다. 추출 용매 조건에 따른 분석 결과, 조추출물 수율은 100% 메탄 올에 1.0% HCl을 이용하였을 경우 수율이 11.4%로서 가장 높음을 보였고, 다음이 80% 메탄올에 1.0% HCl용매로 추 출한 경우였다. 안토시아닌 색소 추출량 역시 1.0% HCl을 함유한 100% 메탄올과 80% 메탄올에서 각각 275.0±4.1, 258.0±1.8 mg/100 g으로 가장 많았다. 항산화 활성 비교에 서는 전체 안토시아닌 색소함량이 많고 폴리페놀 추출율이 높은 1.0% HCl을 함유한 80% 메탄올 용매 추출물에서 가 장 항산화 활성이 높음을 보였다.

This study describes the efficient method for the discrimination of 'Cheonryang' in Panax ginseng Meyer using a STS primer. A total of 208 STS primers were applied to polymerase chain reaction (PCR) amplification for discriminating Korean ginseng cultivars. Co-dominant polymorphic band patterns were generated with two primers, MFGp 0019, MFGp 0248, and successful identification of 'Cheonryang' was achieved from out of 11 Korean ginseng cultivars. Two different sizes of DNA band patterns were detected with MFGp 0019 primer. Ten Korean ginseng cultivars shared the same size of amplified DNAs (389 bp), but 'Cheonryang' showed a different size. Thus 'Cheonryang' can be efficiently distinguished from the other ten ginseng cultivars by using the MFGp 0019 primer. In the case of MFGp 0248, two different sizes of DNA band patterns were detected in the eleven ginseng cultivars. Same sized amplified DNA bands (307 bp) were shown in five cultivars (Chunpoong, Gopoong, Kumpoong, Cheongsun, Sunhyang) and 254 bp sized DNA bands were identified in the other 6 cultivars (Yunpoong, Sunpoong, Sunun, Sunone, Cheonryang, K-1). In conclusion, the two STS primers, MFGp 0019, and MFGp 0248, provide a rapid and reliable method for the specific identification of 'Cheonryang' cultivar from a large number of samples.

Amplified fragment length polymorphism (AFLP) is one of molecular marker technique based on DNA and is extremely useful in detection of high polymorphism between closely related genotypes like Korean wheat cultivars. Six Korean wheat cultivar specific marker sets have been developed from inter simple sequence repeat (ISSR) analysis and we can identify the 13 Koran wheat cultivars form other cultivars using six that (Son et al., 2013). We used four combinations of primer sets in our AFLP analysis for developing additional cultivar specific markers in Korean wheat. Twenty-one of the AFLP bands were isolated from ACG/M-CAC primer combination and 19 bands were isolated from E-AGC/M-CTG primer combination, respectively. We used forty bands to design sequence characterized amplified region (SCAR) primer pairs for Korean wheat cultivar identification. Only one of 40 amplified primer pairs, C2, were able to use for wheat cultivar identification. The DNA band of 215bp length was amplified by C2 primer pairs in ten cultivars, Eunpa, Olgeuru, Gobun, Saeol, Milsung, Sinmichal, Jokyung, Sugang, Goso, and Joah. Then C2 primer was applied to these primer sets as newly SCAR marker, six cultivars are identifying from other cultivars, additionally. Finally, to use the C2 and six primer sets, 19 Korean wheat cultivars are identified.

Sequence diversity was accumulated through evolution and breeding process. A set of 595 PCR-based novel insertion/deletion (InDel) markers was designed in order to widen the genetic basis for national rice breeding programs. The markers were generated by analyzing of 40 Korean cultivars and published genome sequences of rice(Oryza sativa L. spp japonica). We selected 112 markers spread across all rice chromosomes among the 595 InDel markers, and they showed polymorphic between rice cultivars, which are 284 Korean japonica and Tongil varieties. Due to their simplicity in design and robustness in genotyping, these InDel markers have been routinely used in quantitative trait loci (QTL) mapping studies and marker assisted selection programs for rice. Moreover, the PCR amplification type of InDel markers was converged to digital code, 0 or 1 and then finally represented as one- and two dimensional bar-code system, which could easily differentiate genetically highly homologous japonica rice cultivars. The developed InDel markers uniquely discriminated among each of the Korean cultivars. Therefore, the systems we developed may be valuable tools in discrimination from cultivars

The precise, fast, and cost-effective identification of important fruit crop cultivars is essential for practical breeding and plant breeder’s rights. Traditional methods for identification of persimmon cultivars are based on the evaluation of sets of morphological characteristics. However, the identification using only morphological traits is difficult to distinguish among genetically closely related cultivars. This study was conducted to develop more reliable DNA markers for identification of the 32 persimmon cultivars in Korea and Japan. In total, 309 random amplified polymorphic DNA (RAPD) markers were identified using 40 different random primers. The 4 (OPP-08) to 14 (UBD159) polymorphic bands were detected with an average of 7.7. The resulting 57 RAPD fragments were selected, and their sequences were determined for developing sequence-characterized amplified region (SCAR) markers. As a result, 15 of 57 RAPD fragments were successfully converted to SCAR markers. A single polymorphic band of the same size as the RAPD fragments or smaller DNA fragments were amplified depending on primer combinations in the 15 SCAR markers. Among these markers, a combination of eight SCAR markers (PS225_200, PSN05_420, PSF13_523, PSN11_540, PS372_567, PS485_569, PSP08_635, and PS631_735) provided sufficient polymorphisms to identify 32 persimmon cultivars depending on number and size of amplicons. These newly developed markers will be useful as a fast and reliable tool to identify persimmon cultivars.

복숭아의 기원은 중국으로 알려져 있으며, 저장기간이 짧아 소비자들의 선호도가 낮았다. 이런 이유로 육종가들은 저장성을 높이는 것과 향과 맛을 좋게 하는데 육종 목표를 설정했으며, 국립원예특작과학원 육종가들은 이 목표에 따라 새로운 품종(‘천홍’, ‘수홍’, ‘하홍’, ‘유명’, ‘백미조생’, ‘천향’, ‘진미’, ‘수미’, ‘미스홍’, ‘유미’)을 육성하였다. 국립원예특작과학원 과수과에서는 육성 품종의 보호와 특허권을 확보하기 위해 분자생물학적 마커의