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        검색결과 21

        1.
        2024.04 구독 인증기관·개인회원 무료
        수염풍뎅이(Polyphylla laticollis manchurica)는 과거에는 흔히 발견되었으나, 1970년대 이후 한반도 내 개체수 가 급격히 감소하여 2005년 환경부에 의해 멸종위기 야생생물 Ⅰ급으로 지정되었다. 또한 해당종의 분자생물학적 연구는 멸종위기종이라는 특성으로 인해 제한적으로 진행되었다. 그로 인해 NCBI 등 공공 데이터베이스에서 제공되는 서열정보들 또한 부족한 실정이다. 이 연구는 이러한 한계를 극복하고 수염풍뎅이의 유전적 특성을 규명하기 위해 생물정보학적 기술을 활용하여 전사체 분석을 진행하였다. Illumina HiSeq 2500 플랫폼을 사용하여 53,433,048개의 RNA reads를 얻었으며, Trinity와 TGICL을 이용한 De novo 어셈블리 분석을 통해 18,172개의 unigenes를 생성하였다. 생성된 unigenes는 GO, KOG, KEGG, PANM DB를 활용하여 annotation을 진행하였다. 그 결과, GO 분석에서는 ‘binding and catalytic activities’와 관련된 항목이 높은 발현을 보였으며, KOG 분석의 경우 ‘Cellular Processes and Signals’ 범주가 높은 비율을 나타내었다. KEGG 분석을 통해 2,118개의 unigenes가 metabolic 카테고리에 annotation된 것을 확인하였다. SSR 모티프 분석에서는 AT/AT (42.90%) 모티프, AAT/ATT (13.13%) 모티프 순으로 많이 나타나는 것을 확인하였다. 이 연구를 통해 분석한 결과 들을 이용하여 유전자원 및 종 정보를 실시간 제공 및 정보 공유가 가능하도록 Database 및 web-interface를 구축하 였으며, 이러한 자료들은 국내 멸종위기종인 수염풍뎅이의 고유한 유전적 특성을 발굴 및 확보할 수 있는 기반자 료로써 활용될 수 있을 것으로 사료된다.
        2.
        2024.04 구독 인증기관·개인회원 무료
        장내 미생물 군집은 소화 과정, 면역 시스템, 질병 발생 등 숙주의 다양한 면에 광범위한 영향을 주는 것으로 알려져 있으며, 주요 장내 미생물 종은 숙주의 생리 기능에 핵심적인 역할을 수행한다고 발표된 바 있다. 곤충의 장내 미생물 군집에 관한 연구가 최근 활발히 이루어지고 있으며, 이들 연구는 주로 장내 미생물 군집과 기생충, 병원체 간의 상호작용, 종간의 신호 전달 네트워크, 먹이의 소화 과정 등을 중심으로 이루어지고 있다. 이러한 연구들은 대부분 Illumina MiSeq을 활용하여 16S rRNA 유전자의 V1부터 V9 영역 중 선택된 특정 부분을 대상으로 짧은 서열 정보를 대상으로 진행되었다. 그러나, 최근에는 PacBio HiFi 기술이 상용화되면서 16S rRNA의 전장 분석이 가능할 수 있게 되었다. 이번 연구는 장수말벌(Vespa mandarinia)의 해부를 통해 gut과 carcass 부분을 분리한 뒤, 각 샘플을 Illumina MiSeq과 PacBio HiFi 기술을 활용하여 미생물 군집 간의 차이점을 확인하기 위하여 수행되었다.
        3.
        2024.04 구독 인증기관·개인회원 무료
        Haemaphysalis longicornis는 사람과 동물에게 여러 심각한 병원체를 전달하는 주요 매개체로, 한반도에 널리 분포하고 있다. H. longicornis는 Rickettsia spp., Borrelia spp., Francisella spp., Coxiella spp., 그리고 중증열성혈소판 감소증후군 바이러스 (SFTS virus) 등을 매개하는 것으로 알려져 있다. 국내에 서식하는 H. longicornis의 미생물 군집과 관련된 연구는 많이 진행되지 않은 것으로 확인되었다. 이 연구는 한반도 내 다양한 지역에서 채집된 H. longicornis의 미생물군집 다양성을 지역별, 성장 단계 및 성별에 따라 분석하였다. 2019년 6월부터 7월까지 질병관리청 권역별기후변화매개체감시거점센터 16개 지역에서 채집한 H. longicornis의 16S rRNA 유전자 V3-V4 영역을 PCR로 증폭 후 Illumina MiSeq 플랫폼으로 시퀀싱하였다. Qiime2를 활용한 미생물 다양성 분석을 통해 총 46개의 샘플에서 1,754,418개의 non-chimeric reads를 얻었으며, 평균 126개 의 operating taxonmic unit (OTU) 을 식별하여 총 1,398개의 OTU를 확인하였다. 대부분의 지역에서 Coxiella spp.가 우점종으로 나타났으며, 특히 Coxiella endosymbiont는 가장 높은 우점도를 보이며, Coxiella burnetii와 계통 발생 학적으로 유사한 것으로 확인되었다. 이 연구를 통해 분석된 결과는 각 지역의 H. longicornis 미생물군집 데이터 베이스 구축에 활용되었으며, 이를 통해 지역별 미생물군집의 특이성을 식별할 수 있게 하였다. 이는 한반도의 H. longicornis에 의한 질병 전파 연구와 이를 통한 공중보건 개선에 기여할 것으로 기대된다.
        13.
        2016.04 구독 인증기관·개인회원 무료
        Brachymystax lenok tsinlingensis (family Salmonidae), cold freshwater fish, is endemic to Asia. This species is currently distributed throughout Russia, Mongolia, China and the Korean Peninsula. B. lenok tsinlingensis in South Korea was severely affected by anthropogenic activities such as habitat destruction, agricultural run-off and water pollution, and hence this fish has recently been dramatically decreased in its population sizes and become now critically endangered. To recover the number of individuals of B. lenok tsinlingensis, stocking or translocation programs have been conducted continuously by local governments since 1970s. However, these programs made little effort to clarify populations that may have originated from stocked, translocated or introduced fish. An understanding of genetic characteristics of endangered populations is critical to develop effective conservation and restoration plans especially because genetic diversity ensues their future fate. Therefore, we assessed the “conservation status” of this species by estimating the level of genetic diversity and genetic structure among ten geographic populations including restored populations via reinforcement and supplementation. Also, we aimed to trace the genetic origins of the newly translocated population (Chiak) through a restoration practice program. Moreover, we inferred the phylogenetic relationships among Korean lenok populations as well as across the Northeast Asia. Two hundred eighteen individuals of B. lenok tsinlingensis were sampled from ten localities (Yanggu, Injae, Seorak, Bangtae and Hongcheon: North Han River basin; Pyeongchang, Chiak and Jeongseon: South Han River basin; Taebaek and Bonghwa: Nakdong River basin in South Korea). Based on mitochondrial DNA (mtDNA) control region and eight nuclear microsatellite loci, we found extremely low levels of within-population genetic diversity, which suggests small effective population sizes (Ne) within populations. For mtDNA control region, each population housed one, or at most, two haplotypes that are restricted to the respective localities, meaning that these ‘genetically unique’ lineages will be lost permanently if the local populations undergo extinction. The overall values of haplotype diversity (h) and nucleotide diversity (π) for the entire Korean population were 0.703 ± 0.024 and 0.021 ± 0.010, respectively. In the case of microsatellites, average number of alleles across the eight loci for the entire population was 9.1 and allelic richness (AR) per population ranged from 2.375 to 4.144 (mean = 3.104). The values of observed heterozygosity (HO) and expected heterozygosity (HE) were similar to each other [HO: 0.400 ~ 0.590 (mean = 0.518); HE: 0.407 ~ 0.608 (mean = 0.504)]. The inbreeding coefficient (FIS) values were generally low, ranging from 0.048 to 0.279. Consequently, the majority of the populations (except Yanggu and Pyeongchang) were not significantly deviated from Hardy-Weinberg equilibrium (HWE), suggesting random mating at these loci tested. In addition, we found that Korean lenok populations were significantly genetically isolated from each other, with private mtDNA haplotypes and microsatellite alleles, indicating limited gene flow among populations, strong effects of genetic drift due to small Ne, or a combination of both. The Mantel test of microsatellites revealed a significant correlation (r = 0.414, P = 0.04) between genetic and geographic distances for pairwise comparisons among the ten populations, while that of mtDNA showed a lack of correlation. Given the shared identical mtDNA haplotype and similar microsatellite allelic distributions between Chiak and Hongcheon populations, we suggest that the restored (introduced) Chiak population would be inferred to be genetically originated from Hongcheon population. Phylogenetic relationships among Northeast Asian populations showed that South Korean lineages have more recently diverged from China (Yellow River), than between North Korea and Russia. Although the phylogenetic relationship would be expected to be associated with geography, South-North Korea and China populations with a similar latitude was more phylogenetically closely related. These findings may suggest a possible scenario for the historical movements of B. lenok tsinlingensis in Northeast Asia during Last Glacial Maximum (LGM). It would be supported by the line of evidence that most lenok populations migrated to southward from Northern Asia such as Russia and Mongolia during LGM because the Korean Peninsula was landlocked as inland epoch and functioned as a southern shelter with Yellow River. For this reason, the Korean Peninsula is suggested to be an important geographical region for better understanding phylogenetic relationships and evolutionary histories of B. lenok tsinlingensis across the Northeast Asia. Despite large efforts made to develop several restoration programs in South Korea for B. lenok tsinlingensis, it is still unknown whether these past restoration efforts were successful or fruitless, mainly because of little attention paid to post-restoration monitoring research. Hence, there was a lack of their published official records. In the future, conservation and restoration projects of the Korean lenok populations should consider the genetic data for a better understanding of their ecological and evolutionary trajectories. And finally, we hope that our findings here can help inform on the future effective conservation and restoration plans for B. lenok tsinlingensis populatio ns in South Korea.
        14.
        2016.03 KCI 등재 구독 인증기관 무료, 개인회원 유료
        The purpose of this study was to investigate the effects of core strengthening training on baseball throwing. A total of 14 subjects were recruited from among middle school baseball players. The main outcome measures were as follows: speed guns were used to measure the velocity of baseballs thrown; scored targets were used to measure throwing accuracy; and 50m measuring tapes were used to measure throwing distances. It was found that core strengthening training improved the velocity of baseballs thrown and throwing accuracy and distance. Thus, core strengthening training is effective for improving the throwing ability of baseball players.
        4,000원
        15.
        2017.01 KCI 등재 서비스 종료(열람 제한)
        In this study, poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV)/graphene oxide (GO) nanocomposite films containing various content of GO were prepared using solution casting method. The effect of GO content on Young’s modulus and dispersion of GO in PHBV matrix was investigated. Also, the thermomechanical properties, oxygen transmission rates and hydrolytic degradation of PHBV/GO nanocomposite films were studied. The addition of GO into PHBV improves the Young’s modulus and decreases thermal expansion coefficient. The improvement can be mainly attributed to good dispersion of GO and interfacial interactions between PHBV and GO. Furthermore, PHBV/GO nanocomposite films show good oxygen barrier properties. PHBV/GO nanocomposites show lower hydrolytic degradation rates with increasing content of GO.
        16.
        2014.09 서비스 종료(열람 제한)
        Molecular markers are useful for selecting to include superior character genetic like as strong immune system and rapid growth in fish. The marker is also very important part of breeding technology in Olive flounder (Paralichthys olivaceus). Single nucleotide polymorphisms (SNPs) marker is already in use widely for genomic research and breeding. But this SNPs marker hardly has been validated for screening functional genes in Olive flounder. We study identify single nucleotide polymorphisms (SNPs) on Expressed sequence tag (EST) database, develop usable SNP marker and apply to wild sample and cultured of olive flounder. As a result, Out of total 4.327 ESTs, 693contigs and 514 SNP from total contigs were detected while these substitutions include 297 transitions and 217 transversions. 144 developed markers were applied in 16 samples (wild 8, culture 8), Out of total marker, only 32 markers had detected polymorphic in sample. Polymorphism of 32 markers was observed in the variety genes region involved in immunity and protein synthesis. And the 32 marker were identified 21 transitions, 11 transversions, and indel was not detected in polymorphic SNPs. The analysis on heterozygosity by sample showed 0.34 in wild sample and 0.29 in cultured sample. In conclusion, we was identified SNP and Polymorphism by designed new marker, it supports that development marker is suitable for SNP detection and diversity analysis in Olive flounder. The outcome of this study can be basic data for researches for immunity gene and characteristic with SNP.
        17.
        2014.07 서비스 종료(열람 제한)
        Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. We constructed a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis and to enable a better understanding of the evolution of leguminous species. The draft genome sequence covers 80% of the estimated genome, of which 50.1% consists of repetitive sequences. In total, 22,427 high confidence protein-coding genes were predicted. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (Vigna reflexo-pilosa var. glabra) provided genomic evidence of a recent allopolyploid event. To further study speciation, we compared de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max and Cajanus cajan. The species tree was constructed by a Bayesian Markov chain Monte Carlo method using highly confident orthologs shared by all 24 accessions. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis.
        18.
        2008.12 KCI 등재 서비스 종료(열람 제한)
        19.
        2006.08 KCI 등재 서비스 종료(열람 제한)
        In this study, the PHYTO-PAM-fluorometric method was used to evaluate the ETRmax in terms of sensitivity to DIN/DIP against 14 microalgae: Prorocentrum micans, Heterocapsa triquetra, Gymnodinium impudicum, Gymnodinium catenatum, Amphidinium caterae, Chlorella vulgaris, Chroococcus minutus, Microcystis aeruginosa, Chlorella ellipsoidea, Nannochloris oculata, Oocystis lacustris, Chroomonas salina, Gloeocystis gigas, and Prymnessium parvum. We found that P. micans, H. triquetra, and A. caterae exposed to the maximum level of DIN/DIP were significantly smaller in the ETRmax than that of the minimum and moderate mixture. Unlikely the ETRmax, the initial slope alpha was not significantly different at the level of 60 DIN/DIP. In G. catenatum, the moderate levels of 15 and 20 in DIN/DIP were found to be significantly different from the ETRmax at Ch1-Ch4. Gymnodinium impudicum had a higher value than that of the ETRmax than that of dinoflagellates used in this study, ranging from 306.1 (Ch4, DIN/DIP: 10) to 520.1 (Ch4, DIN/DIP: 30). The ETRmax value obtained from other microalgae was similar to G. impudicum at any of the ratios of DIN/DIP and channels. Consequently, the influence of offshore water current assures us of the suppression of photosynthesis and electron transport rate in dinoflagellates. Gymnodinium impudicum has not been researched in the area of red tides in Korea, but it will be enough to creat the massive algal blooms in the future because of higher potential photochemical availability.
        20.
        1997.08 KCI 등재 서비스 종료(열람 제한)
        최근 생활수준의 향상과 보건에 대한 관심의 증가로 약용식물 재배와 한약에 대한 연구가 증가되고 있다. 그러나 대량번식을 위한 종자번식에 있어서 많은 문제점을 안고 있다. 특히 산형과 약용식물에 있어서 시호(Bupleurum falcatum)나 회향(Foeniculum vulgare)은 발아율을 증가시키는데 있어서 만족할만한 발아율을 얻지 못하고 있기 때문에 본 연구를 수행하였다. 회향은 60%의 발아율은 나타내며 15, 20, 25, 15~20℃ 의 발아온도 처리간의 별다른 차이가 없었다. 호르몬 처리나 물리화학적 처리에서도 발아를 증진시킬 수 없었다. 이러한 발아불량의 원인은 시호에서와 같이 결국 무배종자가 많은 것으로 추정된다. 해부현미경과 주사현미경으로 종자의 배와 주공을 관찰한 결과 배가 있는 것과 없는 것의 비율이 1/1이며 주공자체내에는 문제가 없었다. Y자형과 일자(一字)형의 배를 가진 종자가 동시에 관찰되었다
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